Xanthomonas campestris pv. raphani: XCR_3040
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Entry
XCR_3040 CDS
T01872
Name
(GenBank) multidrug resistance protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp01501
beta-Lactam resistance
xcp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XCR_3040
01503 Cationic antimicrobial peptide (CAMP) resistance
XCR_3040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xcp03036
]
XCR_3040
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcp02000
]
XCR_3040
01504 Antimicrobial resistance genes [BR:
xcp01504
]
XCR_3040
Chromosome and associated proteins [BR:
xcp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
XCR_3040
Transporters [BR:
xcp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
XCR_3040
Antimicrobial resistance genes [BR:
xcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
XCR_3040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
Beta-barrel_RND_2
BSH_CusB
BSH_CzcB
HH_AAEA_pHBA
HH_YBHG
CzcB_C
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
AEL07905
LinkDB
All DBs
Position
complement(3213597..3214796)
Genome browser
AA seq
399 aa
AA seq
DB search
MRPVPSLRLPLLAVAASVLISACGSPPGGPPPQQGTPVVGVITVRPQPVTLTTQLPGRTV
PYLIAEVRPQVGGIVQTRQFTEGGDVKAGQTLYQIDPATYRASYASAQATLAKAQANLRT
ARLKADRYKELVQIKAISQQEGDDTAATLGQAEADVAAGKASVETARINLAFARMDAPIS
GRIGRSSVTPGALVTANQATALTTIQQLDPIYVDVTQPSAAVLRLKKAMARGDLARAGDG
AAQVSLVLEDGSTYPLQGRLAFSDVTVDQNTGSISLRAVFPNPDADLLPGMYVRAVLQEG
VKAQGVLVPQQAVTRNGAGKPTAFVVGADNKLQLRVLETDRAVGDQWLVRSGLKTGDQLV
VDGLSRARDGVQVKTVPWQPTSASVAGSPSAPAAPRAAN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcctgtcccttcgcttcgcctgccgctcctcgccgttgccgcctccgtcctgatc
agcgcctgcggtagcccgccgggcgggccgcccccgcagcagggcacgccggtggtcggc
gtcatcaccgtccggccgcagccggtcaccctgaccacccagttgcccggccgcaccgtg
ccgtacctgatcgccgaagtacggccacaggtgggcggcatcgtgcagacgcggcagttc
accgaaggcggcgacgtaaaggcagggcagaccctgtaccagatcgacccggcaacctac
cgcgccagctacgccagcgcccaggccaccctggccaaggcccaggccaacctgcgcacc
gcacggctcaaggccgaccgctacaaggagctggtgcagatcaaggcgatcagccagcag
gaaggcgacgacaccgccgccacgctcggccaggccgaagcggatgtggcggccggcaag
gccagcgtggagaccgcgcgcatcaatctggcgttcgcccgcatggatgcgccgatctcc
ggccggatcggccgctccagcgtgacgcccggcgcgctggtcaccgccaaccaggccacg
gcattgaccaccatccagcaactggatccgatctacgtggacgtgacccagcccagcgcc
gccgtgctgcggctgaagaaggcgatggcccgtggcgatctggcgcgtgccggcgacggt
gccgcgcaggtgagcctagtgctggaagacggcagcacctatccgctgcagggccggctg
gcgttctccgatgtgaccgtggaccagaacaccggctcgatcagcctgcgtgcggtgttc
cccaacccggatgccgatctgctgccgggcatgtacgtgcgcgcggtgctgcaggaaggc
gtcaaggcgcagggtgtgctggtgccgcaacaggcggtgacgcgcaatggcgccggcaag
ccgaccgccttcgtggtcggtgccgacaataaattgcagctgcgcgtgctggagaccgac
cgtgcggtgggtgaccagtggctggtgcgcagtggcctgaagaccggtgaccaactggtg
gtggatggcctgtcgcgcgcccgcgacggtgtccaggtcaaaaccgtgccgtggcaaccg
acctcggcatccgttgccggcagcccctccgccccagccgcaccgcgtgcggccaactaa
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