Xanthomonas campestris pv. raphani: XCR_4071
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Entry
XCR_4071 CDS
T01872
Symbol
hmgA
Name
(GenBank) homogentisate 1,2-dioxygenase
KO
K00451
homogentisate 1,2-dioxygenase [EC:
1.13.11.5
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00350
Tyrosine metabolism
xcp00643
Styrene degradation
xcp01100
Metabolic pathways
xcp01120
Microbial metabolism in diverse environments
Module
xcp_M00044
Tyrosine degradation, tyrosine => homogentisate
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
XCR_4071 (hmgA)
09111 Xenobiotics biodegradation and metabolism
00643 Styrene degradation
XCR_4071 (hmgA)
Enzymes [BR:
xcp01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.5 homogentisate 1,2-dioxygenase
XCR_4071 (hmgA)
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Motif
Pfam:
HgmA_N
HgmA_C
Motif
Other DBs
NCBI-ProteinID:
AEL08928
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Position
complement(4356358..4357662)
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AA seq
434 aa
AA seq
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MHNDQRYMTGFGNEFASEAVADTLPVGQNSPQRVAHGLYAEQLSGTAFTAPRSENRRSWL
YRMRPAAVHGTFSLIEQSQFHNDFGHGPVPPDQLRWSPLPLPQTPTDFIDGLYSMAGNGG
PEAMNGVAVHLYAANASMHDRFFYNADGELLLVPQLGRLRVHTELGVLELEPQQIGVIPR
GVRFRVELRDGTARGYVCENFGGLLRLPDLGPIGSNGLANPRDFETPCAAFEQREGRFEL
VAKFQGHLWRADIGHSPLDVVAWHGNYAPYRYDLRRFNTIGSISFDHPDPSIFTVLTSPS
DTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKADGFAPGGASLH
NCMSGHGPDAATFDKASQADLSRPDVITETMAFMFETRAVLRPTAQALQAPHRQGDYQQC
WAGLRNAFQAPPAN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacgaccagcgttacatgaccggcttcggcaatgaattcgccagcgaggcagta
gccgataccttgcccgttgggcagaactcgccgcagcgtgtggcgcacgggctgtatgcc
gagcagttgtcgggcactgcattcaccgcgccgcgtagcgaaaaccggcgcagttggctg
taccgcatgcgtcctgctgcggtgcacggaacgttctcgctgatcgagcagtcgcagttc
cacaacgatttcggccacggaccggtgccgccggaccagttgcgctggagcccgctgccg
ttgccgcagacacccaccgatttcatcgatggcctgtattccatggccggcaacggcggc
ccggaagcaatgaacggcgtggccgtgcatctgtatgcggccaatgcctccatgcacgat
cgcttcttctataacgccgatggtgagctgctgctggtaccgcagctgggccggctgcgg
gtgcacaccgagctaggcgtgctggaactggagccgcagcagatcggcgtgattccacgc
ggcgtgcgcttccgggtcgagctacgcgacggcaccgcacgcggctatgtctgcgagaac
ttcggtggtttgctgcgcctgcccgacctggggccgattggcagtaatggcctggcgaat
ccgcgcgacttcgaaaccccgtgtgcggccttcgagcaacgcgagggccgctttgaactg
gtggccaaattccagggccatctgtggcgtgcggacatcggccattcgccactggacgtg
gtggcctggcacggcaactacgcgccgtatcgctacgacctgcgccgcttcaataccatc
ggctcgatcagcttcgatcatccggacccgagcatttttacggtgctgacctcgcccagc
gacacgcacggcacggccaacatggatttcgcgatcttcccgccgcgctggctggtggcc
cagcacaccttccgcccaccatggttccaccgcaatgtggccagcgagttcatggggctg
gtgcatggcgtgtacgacgccaaggccgacggcttcgcgccgggcggtgcgtcgctgcac
aactgcatgagcggccacggcccggacgcggccaccttcgacaaggcctcgcaagcggac
ctgtcgcggccggacgtcatcaccgagacgatggccttcatgttcgaaacccgcgccgtg
ctgcgccccaccgcgcaagcgctgcaggcaccgcatcggcagggcgattatcagcagtgc
tgggcggggttgcgcaatgcatttcaggcgccgccggcgaactga
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