Xanthomonas citri pv. citri MN11: J163_00896
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Entry
J163_00896 CDS
T03780
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xcr
Xanthomonas citri pv. citri MN11
Pathway
xcr00300
Lysine biosynthesis
xcr00550
Peptidoglycan biosynthesis
xcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J163_00896
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J163_00896
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xcr01011
]
J163_00896
Enzymes [BR:
xcr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
J163_00896
Peptidoglycan biosynthesis and degradation proteins [BR:
xcr01011
]
Precursor biosynthesis
Amino acid ligase
J163_00896
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AJY98641
UniProt:
A0A0U5BP01
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Position
918431..919918
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AA seq
495 aa
AA seq
DB search
MSRSMALSQLLPDVALTHDVQVSGLVMDSRAVRPGDAFVAIAGFGAHGLGFVEQARANGA
AAVLFEPPAPDGLPVPADAIAVPGLRARLGVMADQFHGRPSQAMRMVGVTGTNGKTSTVQ
LLAQALTLLGTPTGTLGTLGVGLYGAAVPTGFTTPLVLPTHALLAQLRDDGAQAVAMEVS
SHALDQGRVDAVHFDVAVFTNLTRDHLDYHGDMAQYGAAKAKLFARAGLKAAVVNLDDAF
GHTLFAALDPALRAIGVSSRAHADASVSAQALQLDHNGINFALNIRGQVHPVHSPLLGRF
NVDNLLAVAGALWAMEFAPAQIASVLGQLQPIHGRMNRLGGAHGAPLVVVDYAHTPDALE
QALSSLRSHAQDRLICVFGCGGERDTGKRPQMAAIAELKADVAIVTDDNPRGEDGDAIVA
DILRGFARPDAAIVQRDRAAAIHQAIGMASPSDIVLIAGKGHEPYQEVAGVRHAFDDALV
AAQALLPRTVLGVRP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgctccatggcgctctcgcagttgctgccggacgtggcgttgacgcacgacgtg
caggtgtccgggctggtgatggatagccgtgccgtgcgtccgggcgatgccttcgtggca
atcgccggtttcggtgcgcatggtctgggctttgtcgaacaggcgcgcgccaatggcgca
gcggcggtgttgttcgagccgccggctcccgatggactgccggtcccggccgatgcgatt
gccgtgcccggtttgcgtgcgcgcctcggcgtgatggccgatcaattccatggccggccg
tcgcaggcgatgcgtatggtcggcgtcaccggtaccaacggcaagacctccaccgtgcag
ttgctggcgcaggcattgacgctgctcggtacgcccaccggcacgcttggcaccttgggc
gtcggtctgtatggcgcggccgtgccgaccggtttcaccacgccgctggtgctgcccacg
catgccttgctggcgcagttgcgcgatgacggtgcgcaggccgtggcaatggaagtcagc
tcgcacgcgctcgatcagggccgcgtggatgcggtgcatttcgacgtggcggtgttcacc
aatctcacccgcgaccatctcgattaccacggcgacatggcgcagtacggtgcggcgaag
gccaagctgttcgcccgcgcggggttgaaagcggccgtggtgaacctggacgatgcgttc
ggccacacactgttcgctgcgctcgatcccgcgctgcgcgcgatcggtgtgagctcgcgc
gcgcatgccgacgccagcgtgagcgcgcaggcactgcagctggaccacaacggcatcaat
ttcgcgctcaatatccggggccaggtgcatccggtgcattcgccgctgctgggccgtttc
aacgtggacaacctgctggccgtggccggcgcgttgtgggcgatggagtttgcgcctgcg
cagatcgccagcgtgctcggccagttgcagcccatccatggccgcatgaaccgccttggt
ggcgcacatggcgcaccgttggtggtggtcgattacgcacacacgcccgatgcgctggag
caggcattgagcagcctgcgctcgcatgcgcaggaccgcctgatctgcgtgttcggctgc
ggtggcgagcgcgacaccggcaagcgcccgcagatggcggcgatcgccgagctcaaggcc
gacgtggcgatcgtgaccgacgacaacccgcggggcgaggacggcgatgcgatcgtggcc
gatatcctgcgcggcttcgcgcgaccggatgcggccatcgtgcagcgcgaccgcgctgct
gcgatccatcaggccatcggcatggccagcccatcggacatcgtgttgatcgccggcaag
ggccacgagccgtatcaggaagttgccggcgtgcggcatgccttcgacgacgccctcgtg
gcggcgcaggcgctgctgccacggaccgtattgggagtgcgcccatga
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