Entry
Symbol
virD4
Name
(GenBank) type IV secretion system protein VirD4
KO
Organism
xcv Xanthomonas euvesicatoria pv. vesicatoria
Pathway
Brite
KEGG Orthology (KO) [BR:xcv00001 ]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
XCV2810 (virD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:xcv02044 ]
XCV2810 (virD4)
Enzymes [BR:xcv01000 ]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.8 protein-secreting ATPase
XCV2810 (virD4)
Secretion system [BR:xcv02044 ]
Type IV secretion system
Conjugal DNA-protein transfer (VirB/D) protein
XCV2810 (virD4)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
complement(3196116..3197789)
Genome browser
AA seq
557 aa AA seq DB search
MSKPKIIAIATLVAVLVGYCLSGYLTLLLLRLDTGLYGWDTYYRYFSALGLPQVAPYATK
IKIAGALGFGLPVLVWAIAVVLIVKPKARALHGDARFAGAADLSKHGLFKPAGNGIVVGK
FNGKLVRLSGQQFVILAAPTRSGKGVGVVIPNLLEYQESIVVLDIKQENFDLTSGWRASQ
GHEVFLFNPFAEDRRTHRWNPLTYVSNDPAFRVSDLMSIAAMLYPDGSDDQKFWVSQARN
AFMAFALYLFENWDEELSLGFPGGAGAPTLGGIYRLSSGDGTDLKKYLKSLSERRFLSSN
AKSAFANLLSQADETFASIMGTLKEPLNAWINPVLDAATSADDFLLTDLRKKKMTIYIGI
QPNKLAESRLIINLLFSQIINLNTRELPKSNPELKYQCLLLMDEFTSIGKVDIIATAVAY
MAGYNIRLLPIIQSMAQLDATYGKDLSRTIITNHALQILYAPREQQDANDYSEMLGYTTI
KKKNVTRGRETTHSVSEERRALMLPQELKAMGNEKEVFLYEGIPHPVKCDKIRYYEDRYF
TARLLPKTEVKTLTIKV
NT seq
1674 nt NT seq +upstream nt +downstream nt
atgtccaaacccaaaatcatcgcaattgccacgctggtggcggtgctagtcggatactgc
ctgtctggctatctcaccctgctgttgctgcggctcgacaccggtctgtacgggtgggac
acctactaccgctatttcagcgcgcttgggttgccccaagtggcgccttacgcgaccaag
atcaagattgcgggcgcgcttggatttggcctgccggtgctggtctgggcgattgccgtt
gtgctcatcgtcaagcccaaggcgcgcgccctgcacggtgacgcgcgcttcgctggcgcc
gccgacctctccaagcatgggctgttcaagcccgccggaaacggcattgtcgtcggcaag
ttcaatggcaagctggtgcgactgagcggccagcaattcgtgattcttgctgcgccgacg
cgctcgggcaagggtgtcggtgtcgtgatcccgaaccttttggagtatcaagagtcgatc
gtcgtcctggacatcaagcaggagaacttcgacctgaccagcgggtggcgcgccagtcag
ggccacgaagtcttcctgttcaacccgttcgccgaagaccgtcgcacgcatcgctggaac
ccgttgacctatgtgtcgaacgaccccgcattccgcgtttcggatctgatgagcatcgcg
gcgatgctgtacccggacggctccgacgaccagaagttctgggtcagccaggcgcgcaac
gcgttcatggcattcgcgctgtacctgttcgagaactgggacgaggagctgtcgctcggt
ttcccgggtggggcaggggcgcccacgctgggcgggatttatcgcctgtcctcgggcgac
ggtaccgatctcaagaaatatctgaagtcgctgtccgagcggcggttcctcagcagcaac
gccaagtcggcctttgccaacctgctgtcccaggcggatgagaccttcgcctcgatcatg
ggcaccttgaaggagccgctcaatgcatggatcaatccggtgctggacgccgccaccagt
gcggatgacttcctgctcacggaccttcgcaagaagaagatgaccatctacatcggcatc
cagcccaacaagctggccgaaagccgcctgatcatcaatctgctcttcagccagatcatc
aacctcaatacccgcgaactgcccaagtccaaccctgagctcaaatatcagtgcctgttg
ctgatggacgaattcacctcgatcggcaaggtggacatcatcgcgaccgcggtagcctac
atggccggctacaacatccgcctgctgcccatcatccagagcatggcgcagttggacgca
acctacggcaaagatctgtcacgcaccatcatcaccaaccacgccctgcagatcctctac
gcgccgcgcgaacagcaggacgccaacgactactccgagatgctgggttacaccaccatc
aagaagaagaacgtcacccgagggcgggagaccacccatagcgtgtcagaagagcggcgg
gctctgatgttgccccaggagctcaaggccatgggcaacgagaaggaagtgttcctgtac
gaggggatcccgcatccggtgaagtgcgacaagattcgctactacgaggatcgctacttc
actgcgcgcttactgccaaaaactgaagtgaaaacgcttaccatcaaagtgtga