Xanthomonas citri pv. citri MN10: J162_01777 Help Entry J162_01777        CDS       T03779                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism xcw  Xanthomonas citri pv. citri MN10 Pathway xcw03030   DNA replication xcw03410   Base excision repair xcw03420   Nucleotide excision repair xcw03430   Mismatch repair Brite KEGG Orthology (KO) [BR:xcw00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     J162_01777    03410 Base excision repair     J162_01777    03420 Nucleotide excision repair     J162_01777    03430 Mismatch repair     J162_01777  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:xcw03032]     J162_01777    03400 DNA repair and recombination proteins [BR:xcw03400]     J162_01777 Enzymes [BR:xcw01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      J162_01777 DNA replication proteins [BR:xcw03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      J162_01777 DNA repair and recombination proteins [BR:xcw03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      J162_01777    NER (nucleotide excision repair)     GGR (global genome repair) factors      J162_01777    MMR (mismatch excision repair)     DNA ligase      J162_01777   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       J162_01777 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia HHH_5 PTCB-BRCT Motif Other DBs NCBI-ProteinID:  AJZ03922 UniProt:  A0A0U5FC04 LinkDB All DBs Position 1873140..1875641 Genome browser AA seq 833 aa AA seqDB search MTASPDPAQRIDALRRRIEDANYRYHVLDEPQMADADYDKLMRELEALERAHPELASADS PTQRVGHLAASRFAEVRHAMPMLSLGNAFSDEEVTEFVRRISERLEVRQPLFSAEPKLDG LAISLRYENGEFVQGATRGDGATGEDVSANLRTVKAIPLRLRGEGWPRVLEVRGEVYMPR AAFEAYNAQMRAQGGKILANPRNGAAGSLRQLDARITAQRPLSFFAYGVGEVSEGALPQA HSAILAQLRAWGFPVSALVEVVQGSDGLLAYYQRIGEARDGLAFDIDGVVYKLDDLAGQR EMGFVSRAPRWAIAHKFPAQEQSTTVEAIEIQIGRTGAATPVARLKPVHVAGVIVTNATL HNADQIARLDVRVGDTVIVRRAGDVIPEVAAVVADQRPPGTQAWQMPTQCPVCGSEIVRE EGQAVWRCSGELTCPAQRKEAFRHFVSRRAMDVDGLGEKFIEVLVDSGLVKGVADLYLLS VDQLLQLRLISTADSPHAFLREAREHLASGAYAQLEASVVGIGVDLAGERDVPQTWQADL LRAGLPSFDWNRKKIATKWAENLIEAIEISRDTTLERFLFALGIEHVGESTAKALSAWFG DLELIRHLPWPLFKRVPDIGGEVARSLGHFFDQAGNQKAIDHLLARKVRIGDTHPPSPKL RGELSLANLLEDLEIPKVTPIRAAQIATAFGSIDALRNGGPEPLVEAGVPQSVAESLAAW LLVPANDTLAVNAQRKLSELLAMLPEAGEEKTGPLDGQTVVITGTLAALTRDAAKQRLEA LGAKVAGSVSKKTAFLVAGEEAGSKLDKAQSLGVEIWDEARLLAFLGDHGQQP NT seq 2502 nt NT seq  +upstreamnt  +downstreamnt atgactgccagcccggatcccgctcagcgcatcgatgccctgcgccgtcgaatcgaagac gccaactaccggtatcacgtactcgacgagccgcagatggccgatgccgattacgacaag ctgatgcgcgagcttgaggccttggagcgcgcgcacccggaattggccagcgccgattcg ccaacccagcgcgtcggccatctggccgcctcgcggtttgccgaagtgcggcatgccatg ccgatgctgtcgttgggcaatgccttcagcgatgaggaagtgaccgagttcgtgcggcgc atcagcgagcggctggaggtcagacaaccgctgttttcggccgaacccaaactcgatggc ctggcgatcagcctgcgctacgaaaatggcgagttcgtgcagggcgccacgcgcggcgat ggcgccaccggcgaggatgtcagcgccaacctgcgcaccgtcaaagcgattccgttgcgt ctgcgcggcgagggttggccgcgggtgctggaagtgcgcggcgaggtctacatgccacgt gctgcgttcgaagcctacaacgcgcagatgcgtgcccagggcggcaagatactggccaac ccgcgcaatggcgcggccggctcgctgcggcagctggatgcgcgcatcaccgcgcagcgc ccgctgagcttcttcgcctacggcgttggcgaagtgagcgaaggcgcattgcctcaggcc cattcggcgatcctggcgcagctgcgcgcgtggggttttccggtcagcgcgctggtcgag gtcgtgcagggcagcgatggtctgctggcgtattaccagcgcatcggtgaggcgcgcgat ggcctggccttcgatatcgatggcgtggtgtacaagctcgacgatctggccgggcaacgc gaaatgggcttcgtctcgcgcgcgccgcgttgggcgatcgcgcacaagttccccgcacag gagcagtccaccacggtggaggcgatcgagatccagatcggccgcaccggtgcggccacg ccggtggcgcgcctgaagccggtgcatgtggccggggtgatcgtcaccaatgccacgctg cacaacgccgaccagatcgcgcggctggatgtgcgcgtgggcgacacggtgatcgtgcgc cgcgccggtgatgtcatccctgaagtggccgcggtggtggccgaccagcgcccgcccggc acccaggcctggcagatgcccacgcagtgcccggtgtgcggttcggagatcgtgcgcgaa gaaggccaggcggtctggcgctgttccggcgagttgacctgcccggcgcagcgcaaggag gcgtttcggcatttcgtctcgcggcgcgcgatggatgtggacggcctgggcgaaaaattc atcgaagtgctggtcgacagtggcctggtgaagggcgtggccgacctgtatctgctgagc gtggaccagctgctgcaattgcgcctgatcagcacggccgacagcccgcacgcgttcttg cgcgaggcgcgcgagcatctggccagcggtgcatatgcgcagctggaagccagcgtggtc gggatcggcgtggacctggccggggagcgcgacgtgccgcagacctggcaggccgatctg ctccgcgcaggcttgccgagcttcgactggaaccgcaagaagatcgccaccaagtgggcg gagaatctgatcgaggcgatcgaaatatcgcgcgataccacgctggagcgttttctgttt gcgctgggcatcgagcatgtgggcgaaagcacggccaaggccttgtcggcctggttcggc gatctggaattgatccggcatctgccgtggccgctgttcaagcgcgtgccggatatcggc ggcgaagtggcgcgctcgctggggcacttcttcgatcaggccggcaatcagaaggccatc gatcatctgctggcgcgcaaggtgcgcatcggcgacacccatccgccttcgccgaagctg cgcggcgagctgagcttggccaatttgctggaggacctggagattcccaaggtgacgccg attcgcgccgcccagatcgcgactgcgtttggttccatcgatgccctgcgcaatggcggt cccgagcctctcgtcgaagccggtgtaccgcagtcagtggccgagtcgctcgcggcctgg ctgttggtgccggccaacgatacgctcgcggttaatgcccagagaaagctttccgagctg ctggcgatgctgccggaggccggcgaggaaaagaccggcccgctcgatggccagaccgtg gtcatcaccgggacgctggctgcgctgacgcgcgatgcggccaagcagcggctggaagcg ctgggcgccaaggtcgccggtagcgtctccaagaagaccgcgtttctggtggccggcgaa gaagccggttccaagctcgacaaggcgcaatcgctgggcgtggagatctgggacgaagcg cgtttgctggccttcctgggcgaccacggccaacagccatga

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