Xanthomonas citri pv. citri MN10: J162_03013
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Entry
J162_03013 CDS
T03779
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xcw
Xanthomonas citri pv. citri MN10
Pathway
xcw01501
beta-Lactam resistance
xcw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xcw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J162_03013
01503 Cationic antimicrobial peptide (CAMP) resistance
J162_03013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xcw03036
]
J162_03013
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcw02000
]
J162_03013
01504 Antimicrobial resistance genes [BR:
xcw01504
]
J162_03013
Chromosome and associated proteins [BR:
xcw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
J162_03013
Transporters [BR:
xcw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
J162_03013
Antimicrobial resistance genes [BR:
xcw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J162_03013
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CusB
Beta-barrel_RND_2
YknX_C
CzcB_C
BSH_CzcB
HH_EMRA
HH_AAEA_pHBA
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
AJZ05127
LinkDB
All DBs
Position
complement(3324866..3326080)
Genome browser
AA seq
404 aa
AA seq
DB search
MRPHASFRLSLLAVAVAATALLSACGSPPGGPPPQEGTPEMGVLTVKQQPVTLTTELPGR
TVPYLISEIRPQVGGIVQSRQFTEGGDVKAGQTLYQIDPAQYRASYASAQASLAKAEATL
RTAQLKAERYKELAQIKAISQQEGDDTDAALGQAKADVAAGKASVETARINLAFARLDAP
ISGRIGRSSVTPGALVTANQATALTTIQQLDPIYIDVTQPSSAVLRLRQAMARGDLEQAG
DGAAKVSLLLEDGSTYPLQGHLAFSDVTVDQNTGSITLRAVFPNPNAELLPGMYVRAVLQ
EGVKEQGVLVPQQAVSRNGAGKPTAFVVGADHKLQLRALETDREVGDQWLVRSGLKPGEQ
VVVEGASRARDGIVVKTVPWQPKATPAAGNAAGPSAPTAPRAAN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcctcatgcctcgtttcgcctgtcgttgcttgctgttgccgttgccgccaccgcc
ttgctcagcgcctgcggcagcccgccgggaggcccgccgccacaggaaggcaccccggaa
atgggcgtgctgaccgtgaagcagcaaccggtgacgctcactaccgagttgccggggcgc
accgtcccgtacctgatctccgaaattcgcccgcaagtgggaggcatcgtccagtcgcgc
cagttcaccgaaggcggcgacgtcaaggctggccagaccctgtaccagatcgatccggcc
cagtaccgcgccagctatgccagcgcgcaggcatcccttgccaaggccgaggcgaccctg
cgcaccgcgcagctcaaggccgagcgctacaaggagctggcgcagatcaaagcgatcagc
cagcaggaaggcgacgacaccgatgccgcgctaggccaggccaaggccgacgtggcagcc
ggcaaggcgagcgtggagaccgcgcgcatcaacctggcgtttgctcggcttgacgcaccg
atctccggacgcatcggccgctccagcgtgaccccgggtgcgctggtgaccgccaaccag
gccaccgcgctgaccaccatccagcagctggacccgatctacatcgacgtcacccagccc
agcagtgcggtgttgcgcctccggcaggcgatggcacgcggcgatctggaacaagccggc
gacggtgcggccaaggtgtcgctgctgctggaagatgggagcacctacccgctgcagggg
cacctggcgttctccgacgtgacagtcgaccagaacaccggctcgatcaccctgcgcgcg
gtcttccccaatccgaacgccgagctgttgccgggcatgtacgtgcgcgcggtgctgcag
gaaggcgtcaaggagcagggcgtgctggtgccgcagcaggcggtgtcgcgcaacggcgcc
ggcaaacccaccgcctttgtcgtcggcgccgaccacaagctgcagttgcgtgcgctggaa
accgaccgtgaggtgggcgaccagtggctggtgcgcagcggcctgaagcccggcgagcaa
gtggtcgtcgaaggcgcgtcgcgcgcacgcgatggcatcgtggtcaagaccgtgccgtgg
cagcccaaggccacgcccgccgccgggaatgctgccggtccttctgccccgaccgcaccg
cgtgcggcgaactag
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