Xenorhabdus doucetiae: XDD1_2194
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Entry
XDD1_2194 CDS
T03784
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XDD1_2194 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_2194 (nth)
Enzymes [BR:
xdo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XDD1_2194 (nth)
DNA repair and recombination proteins [BR:
xdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XDD1_2194 (nth)
Prokaryotic type
XDD1_2194 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CDG17893
UniProt:
A0A068QSC9
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All DBs
Position
2249417..2250049
Genome browser
AA seq
210 aa
AA seq
DB search
MNQQKRVEILTRLRDSNPHPTTELVFNSPFELLISVLLSAQATDVSVNKATAKLYPVANT
PQAILDLGVEGLKTYIKTIGLYNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTQFAPGKNVDEVEKNLLKFVPSEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYTDKTE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacaaaaacgggttgagatcctcacccgcttacgggatagcaatccgcaccca
acaactgagctggtgttcaactcgccatttgagttattaatttctgttttactgtctgct
caggccacggatgtcagcgtaaataaggcaacggcaaaactatatcccgttgccaatacc
ccgcaggcgatccttgatttgggcgttgagggtttaaagacgtatataaaaaccattggg
ttatataacaccaaagccgaaaatgtgattaaaacctgccggatattactggaaaaacat
caaggagaagtaccggaagatcgcgcagcgctggaagcgctgccgggagtcggccggaaa
acggctaatgttgtcttaaatacggcttttggctggccaaccattgccgttgacacgcat
atttttcgtgtcagcaatcggactcaatttgcaccggggaaaaacgtggatgaagttgag
aagaacttattgaaattcgtaccatccgaattcaaggttgattgccaccattggctgatt
ctgcatggtcgctacacttgtattgcccgtaaaccgcgctgtggctcctgtattattgaa
gatctttgtgaatatacggataaaaccgaataa
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