Xenorhabdus doucetiae: XDD1_3012
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Entry
XDD1_3012 CDS
T03784
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00540
Lipopolysaccharide biosynthesis
xdo01100
Metabolic pathways
Module
xdo_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
XDD1_3012 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xdo01005
]
XDD1_3012 (lpxC)
Enzymes [BR:
xdo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
XDD1_3012 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
xdo01005
]
Lipid A
XDD1_3012 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
CDG18711
UniProt:
A0A068QVQ3
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All DBs
Position
complement(3206315..3207232)
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AA seq
305 aa
AA seq
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MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPANAKSVRDT
MLCTCLVNEHNVRISTVEHLNAALAGLGIDNIVIEVDAPEIPIMDGSASPFVFLLLDAGI
EELNVAKKFVRMKESIRVEEGDKWAELAPYHGFSLDFTIDFNHPAIDASSQRYSLDFSAD
SFVRQISRARTFGFMRDIEYLQSKGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGYNIIGAFTAFKSGHALNNKLLQTVLAHESAWEFVTFDDEAEMPLAFRAP
SLVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacactaaaacgtattgttcaggcgaccggcgtcggtttgcacacc
ggtaaaaaagtcacgctgacaatgcgtccagcgccggctaataccggggtcatctatcgt
cgtactgacttgaatcctccggttgattttccggcgaatgccaaatctgtgcgtgatacc
atgctctgtacttgtctggtgaatgagcataatgtgcgtatttcaaccgttgagcatttg
aatgcagcgctggcaggattagggatcgacaatattgttattgaagtcgatgcacccgag
atcccgattatggatggcagcgccagcccgtttgttttcctattattggatgcgggtatt
gaagagctgaatgtcgcgaagaaattcgtgcgcatgaaagaaagcattcgtgtggaagag
ggtgataaatgggctgaattggcaccctatcatggtttcagtctggattttaccatcgat
tttaatcatccagcgattgatgccagttcacagcgctatagtctggatttctctgcggat
tcatttgttcgccaaattagccgtgcgcgtacttttggatttatgcgcgatattgagtac
ttacaatccaaaggcttgtgccttggtggcagctttgattgtgcgattgtcgttgatgat
tatcgtgtgctcaatgaagacggcctgcgttttgaagatgaattcgtccgccataagatg
ctggacgccatcggcgatctgttcatgtgtggctataatattattggcgcctttactgcg
ttcaaatcaggccatgcactgaataacaaattgctgcaaaccgttttggcacatgaaagc
gcttgggaatttgtcacatttgacgatgaagctgaaatgccattggctttccgggctcca
tcactggtgttggcataa
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