Xanthomonas dyei: NYR95_17370
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Entry
NYR95_17370 CDS
T09460
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
xdy
Xanthomonas dyei
Pathway
xdy01501
beta-Lactam resistance
xdy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NYR95_17370
01503 Cationic antimicrobial peptide (CAMP) resistance
NYR95_17370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xdy02000
]
NYR95_17370
01504 Antimicrobial resistance genes [BR:
xdy01504
]
NYR95_17370
Transporters [BR:
xdy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NYR95_17370
Antimicrobial resistance genes [BR:
xdy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NYR95_17370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
WOB53102
LinkDB
All DBs
Position
complement(3994234..3997359)
Genome browser
AA seq
1041 aa
AA seq
DB search
MKLSDLSITRPVMAVVMSLLLIVLGVMSFTRLTLRELPAIDPPIVSVDVEYTGASAAVVE
SRITQVLEDALAGIEGIATIEARSRNGSSDISIEFVQSRDVEAAANDVRDAVSRVSDRMP
DQARPPEISKVEADADPILWLNMSSSTMDTLQLSDYAERYVVDRFSSLDGVAQVRIGGRQ
RYAMRIWLDRDQLAARALTVADVETALQNENVELPAGSIESAQRDFTLRVERSYLKPEDF
AKLPLSKGEGGYVVRLGDVAKVELTSAERRAYFQSNGVPNVGLGIVRNSTANALDVAREA
RAQAEEVQKSLPKGTNIFVAFDTTTFIDAAVERVYHTLIEAVVLVLVVIWVFLGSARAAL
IPAVTVPVCLIVAFIALYAFDFSINLLTLLALVLCIGLVVDDAIVVVENIQRRIDLGEPP
LVAARRGTGQVAFAVIATTAVLVAVFLPVGFLEGNTGRLFRELAVALAAAVAISAFVALT
LTPMMSSKLLRSHSVAKPNRFHHWFNGRMQAVSGAYGRSLERHVHRTWIFALLMLLALGA
SAWLMSRIPSELAPAEDRGNFQIMIDGPEGAGFDYTVGQMHQVEDILRPYVGPDKPIVRA
NPRVPGGFGSSEEMHTGRVSVFLQDWEKRTRPTTEVADELQQKLSVLSGVRARTQVSGGL
VRSRGQPFQLVLGGPDYAEIAQWRDRILQRMEANPGLVGPDSDYKETRPQMRVNIDRLRA
ADLGVPVTAIGGALEAMMGSRRVTTFVDNGEEYDVMLQAGREGRMSPEDLTAIRVRSSRG
ELIPLSNLVSLSEVAEAGTLNRFNRLRAITITAGLAPGYPLGDAIAWAQQAAQEELPEYA
QLDWKGESREYQQSGSAVLLTFGMALLVVYLVLAAQFESFAHPLVIMLTVPLAVLGALVG
LWLTGGTLNLFSQIGIVMLVGLAAKNGILIVEFANQLRDEGRSVHQAIVESASVRLRPIL
MTSIATVVGAIPLVVAGGPGSASRATIGVVVIFGVSLSTLLSLYVVPAFYSLIAPYTKSP
EAVARELETLEATTPSVGGHA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctccgacctgtccattacccgcccggtgatggcggtggtgatgagtctgttg
ctgatcgtgctgggagtgatgtcgttcacccgcctcacgctgcgagaactgccggcgatc
gacccacccatcgtctcggtggatgtggaatacaccggcgcctcggcagcggtggtggaa
agccgcatcacccaggtgctggaagacgcgctggccggtatcgagggtatcgccaccatc
gaagcgcgcagtcgtaacggttcgtccgacatcagtatcgagttcgtgcaatcgcgcgat
gtggaagcggccgccaacgacgtgcgcgatgcggtcagccgcgtctccgaccgcatgccc
gaccaggcgcgcccgccggaaatctccaaggtcgaagccgacgccgaccccatcctgtgg
ctcaacatgagctccagcacgatggacacgctgcagctgtccgactacgccgagcgctat
gtcgttgaccgcttttccagcctggatggcgtggcgcaggtgcgcatcggcggacgccag
cgctatgcgatgcgcatctggctggaccgcgaccaactggccgcacgcgcactcaccgtg
gccgatgtcgaaacggcgctgcagaacgaaaacgtggagttgccggccggcagcatcgaa
tcggcgcagcgcgatttcaccttgcgtgtggagcgcagctacctcaagccggaagatttc
gccaagctgccgctcagcaagggcgagggcggctatgtggtgcgcttgggcgacgtggcc
aaggtggagttgacctcggccgaacgacgcgcctatttccagagcaatggcgtgcccaac
gtgggcctgggcatcgtgcgcaactccaccgccaacgcgctggatgtcgcgcgtgaggcg
cgcgcgcaggccgaagaagtgcagaagtcgctgccgaagggcaccaacatctttgtcgcc
ttcgacaccaccaccttcatcgacgcggcggtggagcgcgtctatcacacgctgatcgaa
gcggtggtgctggtgctggtggtgatctgggtgtttctgggtagcgcacgtgcggcgctg
attccggcggtcacggtgccggtgtgtctgatcgtcgcattcattgcgctgtacgcgttc
gatttctcgatcaacctgctcaccttgctggcgctggtgctgtgtatcggcctggtggtg
gacgatgccatcgtggtggtggaaaacatccagcgccgcatcgatctgggcgagccaccc
ttggtggccgccagacgcggcaccgggcaggtggcattcgcggtgatcgccaccaccgcc
gtattggtggcggtgtttctgccggtgggatttctggaaggcaataccgggcgcttgttc
cgcgagttggcggtggcgttggccgcggcggtggcgatctcggcattcgtggcgctgacg
ctgacgccgatgatgtcgtccaagctgctgcgctcgcacagcgtggccaaacccaatcgg
ttccatcattggttcaacgggcgcatgcaggcggtgtccggcgcgtacgggcgctcgctg
gagcgtcacgtgcaccgcacctggattttcgcgctgctcatgctgctggccttgggggcg
agcgcctggttgatgagccgtattccgtccgaactggcgccagcggaagatcgcggcaat
ttccagatcatgatcgacggccccgaaggcgccggcttcgattacaccgtcgggcagatg
catcaggtcgaagacatcctgcgcccgtacgtgggcccggacaaacccatcgtgcgcgcc
aacccgcgcgtgcccggcggcttcggcagcagcgaggaaatgcacaccggccgcgtcagc
gtgttcttgcaggactgggaaaaacgcacacgccccaccaccgaagtggccgatgagctg
caacaaaagctcagcgtgctcagcggcgtgcgtgcgcgcacgcaggtcagtggcggcctg
gtgcgcagccgtggccaaccattccagttggtgctcggtggcccggactatgccgagatc
gcgcagtggcgcgaccgcatcctgcagcgcatggaagccaatcccggcctggtcggcccg
gactcggattacaaggaaacccgcccgcaaatgcgcgtcaacatcgaccgcctgcgcgcg
gccgatctgggcgtgccggtgaccgccatcggtggcgcgctggaggcgatgatgggctcg
cgccgcgtcaccactttcgtcgacaacggcgaggaatacgacgtgatgttgcaggccggg
cgcgaaggccgcatgtcgccggaggaccttaccgccatccgcgtgcgctccagccgtggc
gagctgattccgctgtccaacctggtgagcttgagcgaagtggccgaagccggcaccttg
aaccgcttcaatcgcctgcgcgcgatcaccattaccgctggtctggcgccgggctacccg
ttgggcgatgccatcgcctgggcgcagcaggccgcgcaggaagaactgccggaatacgcg
cagctggactggaagggcgaatcgcgcgaataccagcaatccggcagcgcggtattgctg
accttcggcatggccttgctggtggtgtatctggtgctggctgcgcagttcgaaagcttc
gcccatccgctggtgatcatgctcaccgtgccgctggcggtgctgggtgcattggtcggg
ctgtggctcaccggcggcacgctcaacctgttcagtcagatcggcatcgtgatgctggtg
ggcctggcggcgaagaacggcattttgattgtggagttcgccaatcaattgcgcgacgaa
ggccgcagcgtgcatcaggccattgtggaatcggcctcggtgcggttgcgcccgatcctg
atgacgtcgatcgccacggtggtcggcgcgattccgctggtagtggccggcgggcccggc
tcggccagccgcgccaccatcggtgtggtggtgatcttcggtgtgtcgctgtccacgttg
ctgtcgctgtacgtggtgccggcgttctacagcctgatcgccccgtacaccaagtcgccg
gaagcggtcgcacgcgagctggaaaccctggaggcaaccacgccatcggtgggcgggcac
gcataa
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