Xenia sp. Carnegie-2017 (soft corals): 124434095
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Entry
124434095 CDS
T08024
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124434095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
HOOK
CENP-F_leu_zip
zf_C2H2_13
MAD
PspA_IM30
zf-BED
Motif
Other DBs
NCBI-GeneID:
124434095
NCBI-ProteinID:
XP_046839927
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MPGIKIRDEDREKINAKYICSHLLLVNPMQTMCGHLFCQSCINIILGDPDLKCPEDQEKL
SRNDVFPDAFTKRELKSIRLHCPSEQCEWFGSYEELEGHYQVCEHALISCVHKQCNIQLP
RSLLGEHLKNECEYRNVKCEYCGKDVPYALLKDHMENVCEYYPVVCKYCKKKIPRKDIEQ
HQSTTCDEVPTKCEFQAIGCNPDKTILLLRYVMAFVTQLSKYVPRPEFTTAVQNMADQVT
AVRANLSEKFVMLVGKLTGLERRIESLEARGDNDSNNANSSLEVSSMRDKIPTLERQVRE
NSSTLLRYRECLDQIDESLARNTVKITDLEAQRGSRALGSNKAIHSYNGTLLWKIDNYNR
KRQDAINGIKTVLYSAPFYSSQYGYKMCAKIYMNGDGFGKGTHLSLFFVVMKGDYDALQS
WPFQKKITMMLMDQGNGDHMIDAFHSDPQSSSFQRPKSDMNIASGSPLFMPLESLNNRQY
IKDDTLFIKMIVD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaatcaaaatacgtgatgaagatcgagaaaaaatcaacgcgaagtatatttgt
agtcatctcctccttgtcaatccaatgcagacaatgtgtggacacttgttttgtcaatct
tgtattaacattatacttggagatcctgatctaaaatgtcctgaagatcaagaaaaattg
agccgaaatgatgttttccctgatgcttttacgaaacgtgagttgaaaagtattcgttta
cattgtccttctgaacaatgtgaatggtttggctcctacgaagaattggaaggtcattat
caagtttgtgagcatgcgctcatcagctgcgtacataagcagtgtaacattcagttacct
cgctctctccttggtgaacatttgaagaatgaatgtgaatatcgcaatgtaaaatgtgaa
tattgtggtaaagatgtcccgtatgctttacttaaggatcacatggaaaatgtgtgtgag
tattatcctgtggtttgtaaatattgtaagaaaaagataccaaggaaagatattgaacaa
catcaaagtacgacctgtgatgaagtgccgactaaatgtgaatttcaagctattggatgt
aaccctgataaaactatcctcctgttacgatatgttatggcatttgttacacagttaagt
aaatatgtaccacgtccagagtttaccactgctgttcaaaacatggctgaccaagttact
gctgttcgtgcaaatctttcagagaaatttgttatgttagtgggtaaacttacaggtctt
gaaagaaggattgagagtctcgaggctcgtggtgataacgatagtaataatgccaactcg
tcattagaggtttcttcgatgcgtgataaaattccaactctcgaacgacaagtgagagaa
aattcctcaactttactacgatatcgtgagtgcttagatcaaattgatgaatcactagct
agaaacacggtgaagattacggaccttgaagcgcaacgtggctcgcgtgcactggggtcg
aataaagccatacacagctacaatggtacgttactttggaaaatagataactacaatagg
aaaagacaggacgccattaatggtatcaaaacagtattgtacagtgcaccattctacagt
tctcaatatggttacaagatgtgtgctaagatctatatgaatggtgatggttttggaaag
ggaactcatttatctttgttctttgttgtcatgaaaggtgattacgatgcgctacaatca
tggccatttcaaaagaagatcacaatgatgttaatggatcaaggaaatggtgatcacatg
attgatgcttttcattcagatcctcaaagttcctcatttcaacgaccaaagtcagatatg
aatatcgcttctggatcaccactcttcatgccattggaaagtttaaataatcgccagtat
atcaaagatgatacattgtttataaaaatgatcgtcgactga
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