Xenia sp. Carnegie-2017 (soft corals): 124438821
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Entry
124438821 CDS
T08024
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xen01009
]
124438821
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124438821
Protein phosphatases and associated proteins [BR:
xen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124438821
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124438821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Ank
PKD_channel
Ank_3
CMC4
Ank_5
DMF_alpha
Motif
Other DBs
NCBI-GeneID:
124438821
NCBI-ProteinID:
XP_046844992
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MQRGENQNEVEFFDAVKEGDIFSVKSKIRDTNNPVNVNAINSYGKTALQIAAKNSHKDVI
DELLAAKADFKMALLQSVDQHDLEEIKNLVSNLPENIKISDYSFITPTIRAAQLDHYDIV
HYFILHKYFIEKPHECDCNCELCKPKSDMLRSQIAKNHFEGLSSPVYMCLSYLEDKTGKT
EDPLSQAFALNLKLLKRARDDFELKNEYTELSKKCKTFMTELYNCCRNMEEQMALMNVDF
DCSSAHKGTSEERKAVVKWLTKVIESDLKEFVAHPRSQQLLNMVVYSGVPWNIRRKSTTS
LLFAFILYTILFPLIVFIYICFPKKTIVEIMSTPYVKFISHISQFTIFLSLIAASSMRDN
HTPTIIEYYIFLTVVGMMVEKFDEMLRQKGKINNFFKWWNIITIIMLTFFLMAGLTWIVG
YVVKAYGAKKDGYKLLLLGNSFFTVAIVVSVFHFLDFCQVNSTLGPFQLSLYRMIQDVLK
FMLFFSAMFVAVVVGLRNLYSYYNSIQEEMLGQNKSKAENINENFSNLQGVSKHLFWALF
DKIDLEDFDTKDSRFEITQVTGKLLFAIYSIVVVFIALNMLIAMMNHSYEYVSQEQDIQW
KFSRTEVWLDFVKKGCTLPAPYNLIPNPRFINRFLKRKRQKKLRKDTLIPEQHELEKLEE
RRNIMKCLIDRYFQKQKVQKKEALATVKDIKESEYKIVRFMKQQHHSPVKTM
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggggagaaaatcaaaacgaagtagaattcttcgatgctgttaaggaaggtgac
attttttcggtgaagagtaaaatccgcgacaccaacaatccagtcaatgttaacgccata
aactcgtatggaaaaacggcacttcaaatcgcggccaaaaacagtcacaaagacgtcata
gatgagcttttggcggcaaaggccgacttcaaaatggctcttttacaaagcgttgaccaa
cacgatcttgaagagataaaaaatttggtgtcaaaccttccagaaaacatcaagatatca
gactatagcttcatcacgccaacaataagagcagctcaattggaccactacgacattgta
cattattttatattgcacaagtactttatcgaaaagccacatgagtgtgattgcaattgt
gaattatgcaaacccaagtcggacatgcttcgttcacagattgctaaaaatcattttgaa
gggctttcaagtccggtctatatgtgtttaagttatttagaagacaagacaggcaaaacg
gaagacccgctctctcaagcattcgctctaaatttgaagttactcaagcgcgccagagat
gattttgaactaaaaaacgaatacaccgaattgtcaaagaaatgcaaaactttcatgacg
gaactgtacaattgttgcagaaacatggaggaacaaatggcactcatgaatgtcgatttc
gactgtagtagtgcacacaaaggaacaagcgaggaacgtaaagctgttgtgaaatggctg
acgaaagtcattgagagcgatctaaaagagttcgtggcgcatccgcgtagccaacaactg
ttgaacatggtcgtgtactccggcgtcccatggaatatccgaagaaaatccacgacatct
cttctttttgcttttattctatataccattcttttcccactaattgtgtttatatacatc
tgcttccccaaaaaaacgatagtggaaatcatgtcaactccatacgtgaagtttatcagc
cacatttcgcagttcacgatctttctttcgctgattgctgcctcgtcaatgcgcgataac
cacactccaacaattatagaatactacattttcctaaccgtcgttggaatgatggttgaa
aagtttgatgaaatgctacgtcaaaaaggaaaaataaataatttcttcaaatggtggaac
attatcacaatcataatgctgactttcttcctcatggcgggactaacatggatcgtcggt
tatgtcgttaaggcgtacggcgctaaaaaagatggatataagttgctgctgctcgggaat
agctttttcacggtggcaattgttgtcagcgtttttcattttcttgacttttgtcaggtc
aattccacattgggaccgtttcagttgtctctttatcgtatgatacaggatgtcttaaaa
tttatgctatttttttctgccatgtttgtcgcggttgtcgttggtttgagaaatctttat
tcgtattacaacagcatccaagaagagatgttggggcaaaacaaaagcaaggcagaaaac
atcaacgagaatttctcgaatcttcagggagtgagtaaacatctgttctgggcactcttc
gataaaatcgatctcgaagactttgatacgaaagactcacgctttgaaatcacacaagta
acaggaaaactgctgttcgcaatctactcaatcgtggttgtcttcattgctctcaacatg
ctcattgcaatgatgaatcattcatacgagtatgtgtcgcaggagcaagacattcagtgg
aaattcagtcgtactgaagtgtggctggatttcgtaaagaaagggtgcacactaccagct
ccatacaatctaataccgaacccaagattcatcaatcgctttttaaagagaaagcggcaa
aagaaattgagaaaagatacacttattccagaacaacacgaattggaaaaattagaagag
agaagaaacataatgaaatgcttaatcgatcgatattttcaaaaacaaaaagttcagaaa
aaagaagctttggcaacggtgaaggacatcaaagaaagcgaatacaagatcgtgagattt
atgaaacaacaacatcattctcccgttaagactatgtaa
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