Xenia sp. Carnegie-2017 (soft corals): 124441854
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Entry
124441854 CDS
T08024
Name
(RefSeq) lysine-specific histone demethylase 1A-like isoform X1
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xen03036
]
124441854
Enzymes [BR:
xen01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
124441854
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
124441854
REST complex
124441854
Histone demethylases
124441854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
Pyr_redox
AlaDh_PNT_C
FAD_oxidored
Thi4
FAD_binding_2
HI0933_like
Pyr_redox_3
FAD_binding_3
GIDA
MurD-like_N
KELK
TrkA_N
NAD_binding_9
Trp_halogenase
Sec10_N
Motif
Other DBs
NCBI-GeneID:
124441854
NCBI-ProteinID:
XP_046848271
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSSSFGATNYMKASNSEFIKSSLPHHREDAMIHSSSSVSSYGYPNTNKGEKHLMTDLNRR
TSQRKRAKVEYSEVDEKLAKLTDDEQSDSELLKDNGVEFDRQNSKQSEKDMMENDDDEDD
DDLPTGLEGAAFQSRLPYDKMTTQESNYFRDISDGQPNVQRQFLYVRNRLLQLWLANPKQ
QLIIEQAIREMDPQQKVESKLVHRVFAFLERYGSINFGVYKQLKPHPKITNSPKILVVGA
GISGLTAARQLQSFGFNVTMIESRERVGGRVATFRKGQYIADLGAMVLTGLGGNPLTVLS
SQVNMELHKINQRCPLFETNGRNVPKDKDDMVEQEFNRLLEATSYITHQLDFNQIDGKPL
TLGQALEMVIKLQEKQVKEQQIIHCKKILEIQEKMKLVLAQMKQVKEKLAVTHQEYLESL
KVPEPRDIDAEFEVRSKLRDICYLCKEYDALDEEQHQLGEKLIELEDNPPSDVYLSSRDR
QILDWHFANLEFANAVPLEHLSLKHWDQDDDFEFSGSHVTVQNGYACLPAALAEDLDIRL
NTAVKQIRYSRTGVEVITQSTTKAAISTTQSFKGDVVLITLPLGVLKAMPETVQFHPPLP
EWKTKAIDRMGFGNLNKVVLCFDRVFWDRSTNLFGHVGSTTAKRGELFLFWNLYKTPILI
ALVAGKAANELEAVADEIIVGRCVAVLKGIFGSGNVPQPRETVVTRWKSDEWSRGSYSYV
AAGSSGNDYDLMASPVANSSPGAGLGPAQPRVFFAGEHTIRNYPATVHGALLSGLREAGR
IADQFLGAPYNAGRM
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttcgtttggtgctacgaactacatgaaagctagcaatagtgaatttatcaag
tcttcattaccacatcatcgggaagacgccatgatacattcaagctcttccgtatctagt
tacggctatccaaacacgaacaaaggagagaaacatctcatgaccgatttaaatcggcga
actagtcaacgtaaacgtgccaaagttgaatactctgaagtggatgaaaagttggcaaaa
ctgacagatgatgaacagtctgactcagagcttcttaaggataatggtgtggagtttgat
cgacaaaattcaaaacaatctgagaaggacatgatggaaaatgatgatgatgaagatgat
gatgacttacctacaggccttgagggtgctgcctttcaaagtcgtttgccgtatgacaaa
atgacaacccaggaaagcaattactttcgggatatttcagatggtcaaccaaatgttcag
aggcagtttctttatgtcagaaacagactgcttcaactgtggttggctaacccaaaacag
caattaatcatagagcaggccatacgggaaatggaccctcagcaaaaagttgaaagcaag
cttgtacatcgagttttcgcgtttttggagcgatatggttcgattaattttggagtatac
aagcagttaaaacctcatccaaaaattaccaattcacccaagattctcgtggttggtgca
ggcatatctggtctgactgctgccaggcagttgcagtcatttggttttaacgtcactatg
atagaatccagggaaagagttggtggtcgagtggcgacgtttcgtaaaggacaatacatc
gctgatcttggtgcaatggtgttaactggactgggtggaaatcctctcacggttctcagt
agccaagtgaacatggaacttcataaaatcaatcagagatgtcctctcttcgagacaaat
ggacgaaacgttccgaaagacaaagacgacatggtagagcaagagttcaatcgtttactc
gaagcgacctcttatattacacatcagttagacttcaatcagatcgatggtaaaccgctg
accctcggacaggccctggaaatggtcatcaagttgcaagaaaaacaagtcaaagaacag
caaatcattcattgcaagaaaattttggagattcaagagaaaatgaaattggttttagca
cagatgaaacaggtgaaagaaaaactcgctgtaactcatcaagaatacttagaatcctta
aaagttcccgaacctagggacatcgatgccgagttcgaagtaaggagtaaactcagagat
atctgttatctatgcaaggaatatgatgcattggatgaggagcaacatcaactcggtgaa
aagttgattgagcttgaagataatcctccaagtgatgtatacttatcgtctcgtgaccgc
cagattcttgactggcatttcgccaatttggagtttgctaacgctgtcccactagagcac
ctctcgttgaaacactgggatcaggacgacgattttgaatttagtggtagtcacgtgact
gtacaaaatggctacgcttgccttcccgcagctctcgccgaagaccttgacattcgtctc
aataccgctgtcaaacagataagatacagtcgaacaggtgtcgaagtcatcacacaaagc
acgacgaaagcggccattagcacgacacagagttttaagggtgacgtggtcttaatcacg
ttaccgttgggtgttttgaaagccatgccagagactgttcaatttcatcctcctttgcct
gagtggaaaacaaaagcaatagacagaatgggatttgggaacttgaataaagttgtccta
tgtttcgatcgtgtgttctgggatcgctcgacgaacctctttggtcacgtgggaagcaca
acagctaagcgtggtgagctattcttgttttggaatctttacaagacacctatattaata
gcgttggtcgcagggaaagctgccaacgagttagaagcagttgccgacgaaataattgtg
ggacgttgtgttgctgtactcaaagggatatttgggagcggtaatgtaccccagcctcgt
gagaccgtagtaacaagatggaaatctgacgaatggtctcgaggttcctactcgtacgtt
gccgccggctcgtcgggtaacgactacgacttgatggcttccccggtcgctaactccagt
ccaggcgctggtctgggtcccgctcaacctagggtattctttgctggggagcatacaata
cgtaactatcctgctacagtccacggtgctttgctcagcggtctcagggaagcagggaga
atcgctgatcaatttctgggcgccccttataacgcaggacgcatgtga
DBGET
integrated database retrieval system
