Xenia sp. Carnegie-2017 (soft corals): 124443416
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Entry
124443416 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: presenilin-1-like
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124443416
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xen01002
]
124443416
Peptidases and inhibitors [BR:
xen01002
]
Aspartic peptidases
Family A22: presenilin family
124443416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
DUF3671
Motif
Other DBs
NCBI-GeneID:
124443416
NCBI-ProteinID:
XP_046849862
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MSDSEADERTCLMSGESTARLCPPSNESTMEVMEQDLDEETNEEIGRLNNVRRRNIQQQD
DGQSSSENNCRNSDDDYNEEEELKYGFKSVMMLIIPVSLCLLVVVATVTSVTYYSKNSGQ
YLIYTPFHEQDGITKTEKATHAFLNAIIVIAVVLAMTILLVVLYIKKCYKIIAGWLILSS
LLLLFFFSFIYIQEVLMVYNRAIDYFTLALIIWNFGVVGMICIHWKGPLLLQQIYLIFVS
ALMALVFIKYLPDWTTWFILVAIAIYDLFAVLCPXGPLQILVRTAQERNEPIFPALIYSS
TVMWSVGMAGGNEAGQNTSERTSQHSFDETSVEGDGAAQDEASQAATALAARSDSQNDSL
EDEEKGVKLGLGDFIFYSVLVGKASSYGDWNTTIACYVAILIGLCLTLLLLMIFKRALPA
LPISIAFGLIFYFATSELVKPFADELASQQVFL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagcgaagctgatgaacgcacttgtctcatgtctggggaatcgactgcacgt
ttatgcccgccttcaaacgagtcgactatggaagtaatggaacaagatttagatgaagaa
actaatgaagaaattggaagactaaacaatgtacgaagacgtaacatacagcaacaagac
gatggccaaagttcgtctgaaaataattgtcggaatagtgatgatgattacaatgaagaa
gaggaattgaaatatggttttaaaagtgtgatgatgctaattattccagtatctctctgt
ttgcttgtcgttgttgcaactgttacatccgtcacatattattctaaaaattcaggacaa
tatttaatttatacacctttccacgaacaagatggaatcacaaaaacagaaaaggccact
catgcttttctcaatgctatcatagtcattgctgtagtcttggcaatgacaatattattg
gttgtactttacatcaaaaaatgttacaagataatagctggctggttgatactttcctcg
ttgcttctgcttttcttttttagttttatatatattcaagaggttttgatggtatacaac
agggcaatagattatttcacgttggctctaattatttggaactttggtgttgtaggaatg
atttgtattcattggaagggtcctcttctacttcaacagatttatttaatatttgtcagt
gcattgatggcacttgtgtttataaaatacctcccagattggacaacatggttcattctc
gtggccattgcaatatatgatttgtttgcggtgttatgtccanaaggacctcttcaaatc
ttggttcgtacggcacaagaaagaaacgagccaatatttcctgcacttatatattcatcc
actgtgatgtggagtgttggaatggcaggtggaaatgaggcaggacaaaacacaagtgaa
agaacaagtcaacattcttttgacgagacttcagttgaaggggatggtgcagcccaagat
gaagcaagtcaagcagcaacagcattagctgcaaggagtgactctcaaaatgactcacta
gaagatgaggaaaagggtgtaaagcttggtcttggtgactttatattttatagtgttctt
gttggaaaggcttcttcatatggagattggaatacaacaatagcatgctatgttgctatt
ctcattggattgtgtttaactcttcttttattgatgatattcaaacgggctcttcctgcc
ttgccaatatcaattgcatttggacttatcttttattttgcaactagtgaattggtaaaa
ccatttgcagatgaactagctagccaacaagtgtttctatga
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