Xenia sp. Carnegie-2017 (soft corals): 124443493
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Entry
124443493 CDS
T08024
Name
(RefSeq) antiviral innate immune response receptor RIG-I-like
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xen04054
]
124443493
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124443493
Pattern recognition receptors [BR:
xen04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
124443493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
Helicase_C
ResIII
DEAD
CARD_2
RIG-I_C-RD
AAA_19
AAA_25
PYRIN
Microtub_bd
AAA_22
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
124443493
NCBI-ProteinID:
XP_046849902
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MIKMQADWKDIRRRQRYFIREIDPLKVIEVMQDVFTQEDCENVRTACTNHGPIVAVRDHL
LGRLKRRGPNSLPKFVLALRKTGQEHAAQLIDPKLKVRGALSNCGRDDRVLEPGVAAGIH
SSCNVMQQVYMYIKLRMLCHIFFCYFNLDVACVLMKEYENGNLKSSIIKKLCSYNFGDIC
FQDLNFNLVIEPDESKKVIETLDNFGDSVNVLVVGMEKLSLKLRDYQSYLVQPALEGKNT
IICAPTGSGKTFVAMEAIKQHVCSSGHRYVAFIVTNLSLVYQQECNLAQYLPESVGISSL
CGSNSPTSSLPQLLEEYQVIVLTAQVLVNSLKKDKTDAPGEKELTIGQFSSCFDECHHTI
KGHPYNEIIPNPCLPQIIGLSASPGIGTSSAEKHIMELCANLDVQEIQLFVGTQPASTSI
TTFSQEQENAFRATVDPVMCRIEVMISEKDFEKSAHPHGSQPYENWVVEMCKKGLGRDIF
TCFEHLKEYNNSLMINEDVRSEDALRYLKENINYKSSTDMEERLRVLFDDAVSAIECSSP
VVSQGLQVLEQRLVEKLSGDGNKSKGIIFVKTRLIALALLNWLESTTSLKVLVNNPSVVI
GCSGQSNGGGDKNSPKFLVLSFIMFHSGGMSKAKQDQKIKNFRNGDSNVIIATSVLLEGI
DVPDCNFVINYGMPGNEITFMQARGRVRSRETGGDGWQYEIIVPSEQAKRKKRDIEKEKI
MKDALLKIENLNKNEFDEFERQLLKIQHKILEEYNKISTKNPAKNITDDVKLLCKKCGVF
ACKAKDIKKLMRTRKVPVGVLDLI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatgcaagccgattggaaagacattcgtcgaagacagcgttattttatccga
gaaattgacccattgaaagtaatagaggttatgcaagatgtttttacacaagaagactgc
gagaatgtaagaactgcgtgtacgaatcacggaccaattgttgctgttcgagaccatttg
cttgggcgattgaaaagacgtggtcccaattcattgccgaaattcgttttagcattacgc
aaaaccggacaagaacacgctgctcaacttattgatcctaagttgaaagtgaggggagct
ctttcaaattgtggcagggatgatagagttctggaaccaggtgttgccgcaggtattcat
tcttcctgtaatgttatgcaacaagtttatatgtatataaaactcaggatgttgtgtcat
attttcttttgttatttcaaccttgatgtggcttgtgtactcatgaaagaatatgaaaat
ggcaacctcaagtcaagcattattaaaaagctttgcagctataactttggagacatttgt
tttcaagatttgaactttaaccttgtcattgaaccagatgaatcaaagaaagtgattgaa
acacttgataactttggtgattctgttaatgttctggtagtgggaatggaaaaattgagc
ttgaaactacgcgactaccagagttatctcgtgcaaccagccttagaaggaaagaacacc
ataatttgtgcaccaacaggtagtggtaagacatttgttgccatggaagcgattaaacaa
cacgtgtgcagctccgggcatcggtacgttgcattcattgttaccaacctaagcctcgtt
tatcaacaggaatgtaatttggcacaatatcttcccgagtccgtcggaatctcgagtctc
tgcggaagtaattcacccacatcttctctgcctcaactccttgaggagtatcaagtgata
gtattgactgcgcaggtcttggttaattccctgaagaaagataaaacagatgcaccagga
gaaaaagagctaacaattgggcagttttcttcttgttttgacgaatgccatcacacgatc
aagggtcatccttacaacgaaatcattcccaatccctgtctgccgcaaatcattggtctc
tcagcttcgcccggtattggaaccagttcggcagagaagcatattatggagctctgtgcg
aacttagatgtacaagaaatacagctcttcgtgggaacacaacctgctagtacttccatt
acaacattttcccaggaacaagagaacgcgttcagagcaactgtcgatcctgtcatgtgt
cgaatagaagtcatgatttctgagaaagattttgaaaaatctgcccatcctcacggaagt
cagccatatgaaaattgggtggtggagatgtgtaagaaaggactggggcgcgatatcttt
acgtgttttgagcatctaaaagaatacaacaattctttaatgattaatgaagatgtccgc
tctgaggatgcccttcgctatctaaaggaaaatataaactataagtcatcgaccgatatg
gaagagagacttcgtgtgctattcgacgatgctgtttcggctatcgaatgctctagccca
gtggtgagtcaaggtttgcaagtgttggagcaacgtcttgttgaaaagttatctggcgat
ggcaacaaatcgaagggaattatttttgtgaaaacacggctgattgctttagctcttctc
aactggcttgaaagtactacttctttaaaagtgttggtgaacaatccttctgttgtgatt
ggttgcagtggtcaaagtaatggaggaggagataaaaattcaccaaaattcttagttctt
agtttcattatgtttcattcaggtggtatgtcgaaagccaaacaagatcagaagattaaa
aactttcgcaacggtgacagcaacgttatcattgccacgtcagtcctacttgaaggtata
gatgtccccgattgtaatttcgtcatcaactatggcatgcctggtaacgaaataacgttt
atgcaagctcgtggccgcgtaaggtcacgagagactggcggcgacggttggcaatacgag
attatcgtaccaagtgaacaagccaagaggaagaagcgtgatatagaaaaggaaaaaata
atgaaagacgcacttttaaaaattgagaatctaaacaaaaatgagttcgatgaatttgag
aggcagttgctcaaaatccaacacaaaatactcgaagagtacaataaaatatcgactaag
aatcctgccaaaaatatcacagatgatgtaaaattgctctgcaagaaatgtggcgtgttt
gcatgcaaggcaaaagacataaagaagctgatgaggacgcgaaaagtaccggtaggtgtc
ctggatttgatatga
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