Xenia sp. Carnegie-2017 (soft corals): 124447739
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Entry
124447739 CDS
T08024
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xen03036
]
124447739
03400 DNA repair and recombination proteins [BR:
xen03400
]
124447739
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124447739
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
124447739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Motif
Other DBs
NCBI-GeneID:
124447739
NCBI-ProteinID:
XP_046854696
LinkDB
All DBs
Position
Unknown
AA seq
2013 aa
AA seq
DB search
MVKLDTFVYDRRRGDEPEKSLQIDTDKLTLDKFKATLRKTFNINANEKFVVVNTNRVVID
SKAALEEVLQNSSTLYILKSVDQALTAPTYERVEYIPHYDTLVKSGIYEYYASEGQDPLP
FAFAELIDNSLAATATNEGIRKVEIRLMFDDALGKPAISVWDNGQGMTSSDLNNWAIYRL
SKFNRSNVPSSKCSEGDTMRYLNSDISWFGVGGKQAIFFIGNATRMITKTSDCGDVHELC
ISKEEFERKEKLRESIYSGKIYNRRPGDCVHIAEEDENLRELIRGEENHKSFTSVVVTGI
NSSKVLYLRYHFDYWCQQLAHIYHYYLHGPQGNEIQSSRNTTSLFQNIDIQVVMYEKGKS
PKRKALRDIDDDLQSQYIRNTASIFEFRAHCEGSAVVEGMLRYHPFLYDSETYPQMSLAK
NNDEDDMDIVVDSRAPRGNRPIFECYWNGRLIPYTSIDCLEWCSPPKKRTNIPPECYNRF
SGALWTNNAFQVSTNKLTFIDLEVKLKEKSTLFNRVILGQEQRAQISRAFNDWIKECHES
HDKQVKFFNFKGIVKRSEFTQKHRQTPWSVFHGIEWDGKIFKTGDLVKTQRSLPVICGVI
QRFLLYGDHDGDVFATGGEMEIIQQPDSLYGDKKVFSLVKLDRNTTAEGLKKFIDDEEAK
LPHKLVIEWPSGDEVQPNSKVHAGSTIGDIRVDILNGKGESISKLPGDRGKRLLLEMKCI
LHEKGNDKVITQHVCQHGGKSWPYWFRKFSNITSLGPHTISLQVIVSDSSANKQPNNFPS
RCIRFNVIEGAIAKFSVGVLEQPLRIASPFNIPLNFSDNFGNPTKPTKKFDVELISNGLE
ISHEGTQIKGTGLIIKNVSVLGKVPSNAGKDFNVKAVVSSINQQQSLKMRLLPGPPHSLV
TDFSDGDIVLENGSPLNLNVFVKDKAGNLTQQPRLNVVCKLTGSSGLPSYSCDCSSTGKS
TLSGENILISKMEKSIKLKAKIELQHFKDIAPIERIIVVNPSTRPARIEVLRSSSNFGKN
IKLGNEEELCCIAGETISGLSFKIFDEGKRQMTIDNSLAAKIKVNWMNKVSRDLLKQGLL
PDIKAPNTVNDTKFCQVSLGAALGVDFSFSLVPQPDKPVNIKCECRDAKIQLGDTLKHDV
IVSFSDQYGNKIVKASTVEKLMTSVSADGLSDSIVNVVVNEDATVSIKNVQFNDNKVGIK
ELKIKFGNLVCYQRIEVGSGPPAILKIININTTQPIGVFNNTRLSKPLTLQLCDCYGNPC
LDSNVKIVLNKDSGLKLNPTPSHKKTDEKGQVTFSAFEVSGERGVYQIRIKALIGRTSID
AEPITLRIDANPNKPVKIVVDHSKFTTNYIAGTALPDFSVHVLAEDDHVMKCNSKDFVMK
LWSVDDNVTQPSTKAISYQPCKKTSSDKDNYYYFRGIPIPEQIGQYCFVLLVSFTGNVKL
KSDVFNICVDPAPPVKLVPVGSLATPTVSNTQRATSRCLMKNTKFVLKDEYDNISGTSLN
GKVEVVIKKPSQIDEVPMLLGNAMMTEFALINGTANVQNISIQQNTAGKDGQEYILSFSV
QISGQQLDIPPFNLPFLFYNDVRKQEQSAQLTRERDHLFTTIKAYRALFETTKQLMDEMN
VAVHEAGLAESKLRTELSRRNVPSQSLRTTQTVDDFISQLTISRNKFQNTPRRRCALNPG
PRGEAGILGKVAHLAEVMDDDIARVLSWHLSGDMDCVITLTTEKAKKVYHESKGSQQVLP
LDSIYKRSLPEWEKPLPHERGRVSYHPAGHPMYARSTLVFPVEKDNCKIVFGMLLGDTII
LDNLDCANSYRQEVVKFTHCPTILTRTGDRIRSNGKFGGFQNRAPPMEKLRGAVFAAPYP
VEYHTVCGQLEQLKAYKQAMTKHAQLQSDLKVQMEQMQTSEMQKKHRECRDAEFQLRRIE
EKLGMTPTQYEIPASPSSMLQSVGNPSLTRSRITRSSLTTRSTPVISPTVSDSREHTPIS
QSNVANGTTPIRGRRHAATSDSYTSPSKRARRN
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagctggatacttttgtatatgatcgtcgtagaggagacgaacctgagaaatcg
ctgcaaattgacaccgataaattgacgttggacaaattcaaagcgacgctccgtaaaact
ttcaacattaatgcgaacgaaaagtttgttgtggtaaatacaaatcgtgttgttattgat
tcaaaggctgcgttagaagaagttcttcagaatagcagcaccctttacatccttaagtct
gtagaccaagccctaactgcaccaacttatgaaagagttgaatacatccctcactatgac
acacttgttaagagtggtatttatgaatattatgcaagtgagggacaggatcctttgcca
tttgcttttgctgaactgattgacaattctttggcagcaacagctaccaatgaaggcatt
cgaaaggttgagattcgccttatgtttgatgatgctttgggaaagccagcaatttctgta
tgggacaatggacaaggaatgacatcctctgacctcaataattgggctatttacagactt
tcaaagttcaatcgcagcaacgtaccatcttctaaatgttctgaaggtgatacaatgagg
tatttgaacagtgatatttcatggtttggagttggtggaaagcaagcaatatttttcatt
ggaaatgccacaagaatgataacgaagacgagtgactgcggcgatgttcatgaattgtgc
atttcaaaggaggaatttgaaagaaaagaaaaacttagagaatccatttacagcgggaaa
atttacaacagaagaccgggggattgtgtccatatcgcagaggaagatgagaatttacgc
gagttgatcagaggtgaagaaaatcataaaagtttcacttcggtcgtcgtcactggaata
aattcatccaaagttttgtatttacgttatcattttgactattggtgtcaacaactggca
catatttatcattactatctccatggacctcaaggaaatgaaatacaatcatcaagaaac
acaacatctctgtttcaaaatattgacatacaggtagtgatgtatgaaaaaggaaaaagc
cctaaacgcaaagcattacgggatatagacgatgaccttcaatctcagtatatcagaaac
acagcgtctatcttcgagtttcgcgcgcattgtgaaggaagtgctgttgtcgaaggaatg
ttgagatatcatccattcctttatgacagtgaaacttatccacagatgtctcttgccaaa
aacaatgacgaagatgacatggatattgttgtggatagtcgagcaccacgtggtaatcga
cctatttttgaatgttattggaatggaagacttattccttacacatctatagattgtcta
gaatggtgttcaccgcctaagaaacggacaaatatcccaccagaatgctacaacagattt
tctggtgcgttgtggacaaataatgcttttcaagttagcactaacaaacttactttcatt
gacttggaagtaaagttaaaagaaaagtccactcttttcaacagagtcattcttggacag
gagcaaagagctcaaatatctcgagcatttaatgattggattaaagaatgtcacgaatca
catgataaacaggtgaaatttttcaactttaaaggtatagtaaaacgcagcgagtttact
cagaaacatcgtcaaacaccgtggtctgtgtttcatggtattgaatgggatggaaagata
tttaaaactggcgacttggtaaaaacacagcgaagtcttcccgttatctgtggtgttatc
caacgattcctgctgtatggtgatcatgatggtgatgtgtttgcaacggggggtgaaatg
gaaataatacagcaaccggattcgctatacggagacaagaaagtattttctcttgtgaag
ttggatagaaatacaaccgctgaaggtttaaagaagtttatagatgacgaggaagctaaa
ttaccgcataagttggtaattgagtggcccagtggagacgaagttcagccgaatagcaaa
gtccatgcaggatctacgataggtgacatacgtgttgatatcctcaatggtaaaggggaa
tcaatcagcaaactcccaggagatagaggaaaacgattattgcttgaaatgaaatgtatt
ttacatgaaaagggaaatgacaaagttatcacacagcatgtctgtcaacatggagggaag
agctggccttattggttcaggaagttctccaacatcacaagtcttggacctcatacaatc
tcactgcaagttatcgttagtgacagttcagctaataaacaaccaaacaattttcctagt
cggtgcattagattcaatgttatagagggtgccattgcaaagtttagtgttggagtacta
gaacagcctttacgtattgcctctccattcaatatccctttaaacttttcggataatttt
ggtaatcccacaaaaccgacgaagaaatttgatgttgaactaatttcaaatggcttagag
atttcccacgagggaacgcaaatcaaaggaacaggtttgatcatcaaaaatgtttctgtc
cttggtaaggttccatctaatgctggaaaggatttcaatgttaaagctgttgtttctagc
attaatcaacaacaatcattaaaaatgcgtttattaccaggtccacctcattctcttgtt
actgacttttctgatggagatattgtcttagagaatggctcaccacttaatcttaacgtt
tttgttaaagacaaggctggtaatttaacacagcaaccgcgactcaacgttgtgtgtaag
ttaacaggatcaagtggcttaccgtcatattcatgtgactgcagttctacaggaaaatca
acgttaagtggagagaatatcttaataagtaaaatggagaaaagtataaaactgaaagcc
aagatcgaactacagcatttcaaagatattgcacccattgaaagaatcattgtggtgaat
ccaagcacccgacctgctcggattgaagttcttcgttcatcttcaaattttggcaaaaac
ataaagttaggaaatgaagaggaactttgttgtattgctggagaaacaatcagtggatta
agtttcaagatctttgatgaaggaaaacgacaaatgacaattgataactctttagctgcc
aaaattaaggtaaattggatgaacaaagtgagtcgagatttgctgaagcaaggattatta
ccagatattaaggctccaaatactgtcaatgatacgaagttttgtcaagtttcattggga
gctgcgttaggagttgatttttccttctcgttggtgccacaaccagacaaacctgtgaac
ataaaatgtgaatgtcgtgatgcaaaaattcagttgggtgacactctaaaacatgacgtc
attgtatcattttccgatcagtatggtaataagattgtcaaggcgtctaccgtcgagaag
ttaatgacatccgtttctgctgatggattgtccgattcaatcgtaaacgttgttgtaaat
gaggatgcaacggtctcaataaagaatgtacaatttaatgataataaagttgggatcaaa
gaattgaaaattaaatttggcaatcttgtgtgttaccaacgtattgaggtgggaagcggt
ccacctgcgattttgaagattatcaacatcaatacaacacagccaattggtgtatttaac
aatactcgtctttcgaagccattaactcttcaactctgcgattgctacggtaatccttgt
ctggatagtaatgttaaaattgtcttaaataaggattctggattgaagctaaatcctaca
ccatcgcataagaaaactgacgaaaagggccaagtgacattttctgcttttgaagtatca
ggagaaaggggtgtctaccaaataagaattaaagctcttattggtcgaacatcaatagat
gctgaaccaataacgttgaggatcgatgctaatcctaacaaaccagtcaaaatcgttgtt
gatcattcaaagtttacaacaaactacattgcaggcactgcattaccagatttttctgtt
catgttttggctgaagatgatcatgtaatgaaatgtaatagtaaagatttcgtcatgaaa
ctttggtctgtggatgacaacgttacacaaccgtccacaaaggctatttcgtatcaaccc
tgtaaaaaaacgtcttcagacaaagacaattattactatttcagaggaatccctattccc
gagcaaattggtcaatattgctttgtgttgcttgtttccttcacagggaacgttaaattg
aaatccgatgttttcaatatttgtgtggatccagcaccacctgttaaacttgtgccagtt
ggtagtcttgctacaccgacagtatcaaacacgcaaagagcaacaagccgttgtctcatg
aaaaacacgaaatttgtcttaaaggatgaatatgataacatcagtggcacatctctaaat
ggaaaagttgaagttgttattaaaaaaccctctcaaattgacgaagttccaatgttacta
ggcaacgctatgatgacggaatttgctctcatcaatggcacggctaatgttcaaaatatt
tctatacaacaaaacacagcagggaaagatggtcaggaatatattctcagttttagtgtt
caaatttctggacaacagttagacattcctcctttcaatttacctttcttattttataat
gacgtccgtaaacaggaacaaagtgctcaactaacacgagaacgcgatcatctttttacg
accattaaagcatacagagctctttttgaaacaacaaaacaattgatggacgagatgaat
gttgctgtacacgaggcagggctggccgaatctaaactacggacagaattatcacgacga
aatgttccctcacagagccttcgaacaactcaaactgtagacgattttatatcacagttg
acaatcagtcggaacaaattccaaaacactccacgaaggcgttgtgctttgaatcctgga
ccccgcggtgaggcgggaattcttggaaaggttgctcatcttgcggaagtaatggatgat
gatattgctcgtgttttatcttggcatctttctggtgatatggattgtgttataacactt
acaaccgagaaggcgaagaaagtttaccatgaatctaaaggaagtcaacaagttttgccg
ttagattctatttacaaaagaagtcttcctgagtgggagaaacctcttcctcatgagcga
ggacgtgttagctatcaccccgctggtcatccaatgtatgcaaggtcaactctcgttttt
cctgttgaaaaagacaattgtaaaatagtgtttggtatgcttcttggagataccattatt
ttggataatcttgattgcgcaaattcttacagacaggaggttgtaaagtttacacattgt
cctacaattttaacaagaactggtgaccgcattaggagcaatggtaaatttggtggattt
caaaaccgagcacctcccatggagaagctacgaggagctgtatttgctgcaccttatcct
gttgaataccacactgtctgtggtcaacttgagcaacttaaagcatataaacaagcaatg
acgaagcatgctcagttacaaagtgatcttaaggttcagatggaacaaatgcaaacttcg
gaaatgcaaaaaaaacatcgtgaatgtcgtgatgctgagtttcaattacgacgtattgaa
gaaaagttaggaatgactcctactcaatatgaaatacctgcaagtccaagttctatgtta
cagtctgttggaaatccatctttaacaagatcacgcattacaagatcatctttaacaaca
aggtcaacccctgtcattagtccaacagtttcagattcaagggagcacacccctatctca
cagtctaatgttgcaaatggaacaacaccaattcgcggtcgacgtcatgcagctacttct
gattcctatacatctcctagtaaacgagcaagacgcaattaa
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