Xenia sp. Carnegie-2017 (soft corals): 124448251
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Entry
124448251 CDS
T08024
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03174
TNF receptor-associated factor 3
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124448251
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
CENP-F_leu_zip
PspA_IM30
CENP-Q
Zn_ribbon_ACC
Zn_ribbon_9
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
124448251
NCBI-ProteinID:
XP_046855203
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MEAAKKFVLSRLLPELTGKCSRFSWVKRFIALFIAVILSKLSSLCEYLVFDSDSDNEADV
ADMTPCSSSTRWVVKYDKAQWRVTYPSDMPALTFYACSIYRDPNPKCPEDQEKLSKDDVF
PDTFTKRELKIIRSHCPFEKCKWFGTYKDLEDHSQVCEHALISCVHNQCNIQLPRSLLNE
HLKNECEYRNVKCEYCGKDVPYALLKKKIPRKDIEQHEEATCDEVPTKCEFKAIGCSYVK
LLKRKEIQQHKNDNLIDHVSFLLRYVVAFVTQLSNYVPRPEFTTAVQNMGDQVTVVRANL
SEKFVILVGKLTGLERRIESLENPCNSNINNTHYLDVSSMSERIATLERQVKDNSSNILR
FRESLDEIDESLARNTIKITDLEAQRGSRALGSNQAIHSYNGTLLWKIDNFSKKRQDAIN
GIKTALYSPPFYSSKHGYKMCAKIYMNGDGFGKGTHLSLFFVVMKGDYDALQTWPFRKKI
TMILMDQGNGDHMIDAFHSDPQSSSFQQPKSDMNIAYGSPLFMPLEILNNRRYIKDDTLF
IKLIVD
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcaaagaaatttgtgttgagtagactccttccagagttaactggaaaatgc
tcaagattttcttgggtcaagcgatttatcgcactcttcattgcagttattttatctaaa
ctcagttctctttgtgaatatttggtgttcgattctgattctgacaatgaagcagatgtg
gctgatatgactccgtgttcatcgtctacaagatgggttgtcaagtatgacaaagcccaa
tggcgtgtgacatatcctagtgatatgcctgcattgactttttatgcttgttcaatctat
agagatcctaatccaaaatgtcctgaagatcaagaaaaattgagcaaggatgacgttttc
cctgatactttcacaaagcgtgaattgaaaattattcgttcacattgtccttttgaaaag
tgcaaatggtttggtacctacaaagatttggaagaccattctcaagtttgtgagcatgca
ctcatcagctgtgttcacaatcagtgtaacattcagttacctcgctctctcctcaatgaa
catttgaagaatgaatgtgaatatcgaaatgtaaaatgtgaatattgtggtaaagacgtc
ccgtatgctttacttaagaagaagataccaaggaaagatattgaacaacatgaagaagca
acttgtgatgaagtgccgacgaaatgtgaatttaaagctattggttgcagctacgttaaa
ctgctgaaacgaaaggagatccaacaacataagaatgacaatttaattgatcatgtgagc
ttcctgttacgatatgttgtagcatttgttacacagttaagtaactatgtaccacgtcca
gagtttactactgctgttcaaaacatgggtgatcaagttactgttgttcgtgctaatctt
tcagaaaaatttgtaattttagtgggtaaacttacaggtcttgaaaggaggattgaaagt
ttagagaatccttgtaatagcaatattaataacacccattatctagatgtttcctcgatg
tctgaaaggatagcgactctcgagagacaagtgaaagataattcctcaaatatactacga
tttcgtgagagcttagacgaaattgacgaatcactcgcgagaaacacgataaagattacg
gaccttgaagcgcaacgtggctcgcgtgcactggggtcgaatcaggccatacacagctac
aatggtacgttactttggaaaatagataacttcagcaagaagagacaggacgccattaat
ggtatcaaaacagccttgtacagtccaccattctacagttctaaacatggttacaagatg
tgtgctaagatctatatgaatggtgatggttttggaaagggaactcatttatctttgttc
tttgttgtaatgaaaggtgattacgatgcgctacaaacatggccatttagaaaaaagatc
acaatgatattaatggatcaaggaaatggtgatcacatgattgatgcttttcattcggat
ccccaaagttcttcatttcagcaaccaaagtcagatatgaatattgcttatggatcacct
ctctttatgccattggaaattttaaataatcgtcgatacattaaagatgatacattattc
attaagctcattgttgactga
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