Xenia sp. Carnegie-2017 (soft corals): 124448713
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Entry
124448713 CDS
T08024
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124448713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_6
U-box
CENP-F_leu_zip
Dynamitin
PspA_IM30
zf_C2H2_13
Motif
Other DBs
NCBI-GeneID:
124448713
NCBI-ProteinID:
XP_046855615
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MIHTVETDLLKMPGTKIRDKDRNKMNLKFICTYCNHLLVNPMQTSCGHLFCKSCMDIILG
SSDPKCPEDQEKLSRNDVFPDAFTKRELKMIRLHCPSEQCEWFGTYEELEGHSQVCEHAL
IRCIHKQCNIQLSRSLLDEHLKNECEYRNVKCEYCDKDVPYASLKDHIEKVCENAPVLCK
YCEKKIPRKDVENHESTTCDEMPTTCEFQAIGCNYKKTLKRKEIRQHMNDNLIDHVSLLL
RYVMAFVTQLSNYVPRPEFTTAVQNMADQVTAVRANLSEKFVMLVGKLTGLERRIESLED
RGGNDSNNVHSSLEVSLMRDRIVTLEQQLRDKSSTILRFRERLDQIDESLARNTIKITDL
EGQRGARTLGSNQAIHSYNGTLLWKIDNFNRKRQDAINGMKTALYSPPFYSSQYGYKMCA
KIYMNGDGFGKGTHLSLFFVVMKGDYDALQTWPFQKKITMMLMDQGNGDHMIDAFHSDPQ
SSSFQRPKSDMNIASGSPLFMPLESLKNRQYIKDDTLFLKMIID
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatacacactgttgaaacagatttactcaagatgccaggaacaaagattcgtgataaa
gatcggaataaaatgaacttaaagttcatatgtacttactgtaatcaccttcttgtcaat
ccaatgcagacttcatgtggacatttgttttgtaaatcttgtatggacattattcttgga
agttctgatccaaaatgtccggaagatcaagaaaaattgagcagaaatgatgttttccct
gatgcttttacgaagcgtgagttgaaaatgattcgtttacattgtccttctgaacagtgc
gaatggtttggtacatatgaagaattggaaggtcattctcaagtttgtgagcatgcgctc
atccgctgtatccacaagcaatgtaacattcagttatctcgctctctccttgacgaacat
ttgaagaatgaatgtgaatatcgaaacgtgaaatgtgaatattgtgataaagatgtccca
tatgcttcacttaaggaccacatagaaaaggtgtgtgaaaatgcaccagtgctttgtaaa
tattgtgagaaaaagataccaaggaaagatgttgaaaaccatgaaagtacgacttgtgat
gaaatgccgactacatgtgaatttcaagctattggatgtaactataagaaaactttaaaa
cgaaaggagatccgtcaacatatgaatgacaatttaattgatcatgtgagccttctgtta
cgatatgttatggcatttgttacacagttaagtaactatgtaccacgtccagagtttacc
actgctgttcaaaacatggctgaccaagttacagctgttcgtgccaatctttcagaaaaa
tttgtgatgttggtaggtaaacttacaggtcttgaaaggaggattgagagtctcgaggat
cgtggtggtaacgacagtaacaatgtccattcgtcattagaggtttccttgatgcgtgat
aggattgtgactctagagcaacaattgagagataaatcctcaactatactacgatttcgt
gaacgtttagatcaaattgacgaatcacttgcaagaaacacgataaagattacggacctg
gagggccaacgtggtgcgcgaacactagggtcaaatcaggctatacacagctacaatggt
acgttactgtggaaaatagataacttcaatcgaaagagacaggatgccattaatggtatg
aaaacagccttgtacagtccaccattttacagttctcaatatggttacaagatgtgtgct
aagatctatatgaatggtgatggttttggaaagggaactcatttatctttgttttttgtt
gtcatgaaaggtgattacgatgcactacaaacatggccatttcaaaaaaagatcacgatg
atgttaatggatcaaggaaatggagatcacatgattgatgcttttcattcagatcctcaa
agttcctcatttcagcgaccaaagtcagacatgaatatcgcttctggatcgccactcttc
atgccattggaaagtttgaaaaatcgtcagtatattaaagatgatactctttttcttaag
atgataattgactga
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