Xenia sp. Carnegie-2017 (soft corals): 124449673
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Entry
124449673 CDS
T08024
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04120
Ubiquitin mediated proteolysis
xen04140
Autophagy - animal
xen04144
Endocytosis
xen04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124449673
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124449673
04140 Autophagy - animal
124449673
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124449673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124449673
04121 Ubiquitin system [BR:
xen04121
]
124449673
Enzymes [BR:
xen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124449673
Membrane trafficking [BR:
xen04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124449673
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
124449673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF
TRAF3_RING
zf_C2H2_13
zf-C3HC4_2
Tropomyosin
DUF16
zf-C3HC4
Zn_ribbon_ACC
zf-RING_5
RNase_Y_N
Exonuc_VII_L
zf-RING_UBOX
Prok-RING_4
DUF3450
Spc29
ATG14
zf-U1
Motif
Other DBs
NCBI-GeneID:
124449673
NCBI-ProteinID:
XP_046856582
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MPGIKIHDEDREKIHSRYFCGYCNLLVVNPIQTSSCGHLFCQACFDILLGGPDPKCPEDQ
EKLSKKNAFPDNFIKRELKSIRLHCPSEKCKWFGAYEELEGHSQVCEHALTSCIHKQCNI
QLPRSLLDEHLKNECEYRNVKCEYCGKDVPYASLMDHKENVCENAFVTCKYCNQMIPRKD
IEHHESTICDEVPTDCEFQAIGCRHDKTLERREIRQHMNDNVIDHMSLLLRYVQRPQFTT
AAQNLGDRITAVRSNPSEKFVMLAGKLTGLERRIESQERRIESQERRIESQEMRIESQEM
RIESQERSIESRERRIESQERRIESQERRIESQERSIESQERMIESQERRIESQERSIDS
LERRIENLENRGEENRIASLERQATAISTISQRMWESLDERGDLPEEPHNAREL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccaggaatcaaaatacatgatgaagatcgagaaaaaattcactcaaggtatttttgt
ggttactgtaatcttctcgtggtcaacccaatccaaacctcctcttgtggacacttgttt
tgtcaagcttgttttgacatcctgctcggaggtcctgatccaaaatgtcctgaagatcaa
gaaaaattaagcaagaaaaacgctttcccggacaatttcataaaacgtgagttgaaaagt
attcgtttacattgtccctctgaaaaatgcaaatggtttggtgcctatgaagaattggag
ggtcattctcaagtttgtgagcatgcgctcaccagctgtatacataaacaatgtaacatt
cagttacctcgctctcttcttgatgaacatttgaagaatgaatgtgaatatcgaaatgtg
aaatgtgaatattgtggtaaagatgtcccgtatgcttcacttatggatcacaaagaaaat
gtgtgtgaaaatgcattcgtcacttgtaaatattgcaatcaaatgatacccaggaaggat
attgagcaccatgaaagtacaatttgtgatgaagtgcccactgactgtgaatttcaagct
attggatgcagacatgacaaaactttagaacgaagggagatccgacaacatatgaacgac
aacgtaattgatcatatgagcctcttactacgatatgtacaacgtccacagtttaccact
gctgctcaaaacttgggtgaccgaatcacagctgttcgttctaatccctcagaaaaattt
gtgatgctagcaggaaaacttaccggcctggaaaggaggattgagagtcaggaaaggagg
attgagagtcaggaaaggaggattgagagtcaggaaatgaggattgagagtcaggaaatg
aggattgagagtcaggaaaggagtattgagagtcgggaaaggaggattgagagtcaggaa
aggaggattgagagtcaggaaaggaggattgagagtcaggaaaggagtattgaaagtcag
gaaaggatgattgagagtcaggaaaggaggattgagagtcaggaaaggagtattgatagt
ctggaaaggaggattgagaatcttgagaatcgtggtgaggaaaatcgaatagcttccctt
gagcgtcaggctactgctatttccacaatttcacaaaggatgtgggagagtttggatgag
aggggtgacttgccggaagaaccgcataatgctcgcgaactttga
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