Xenia sp. Carnegie-2017 (soft corals): 124453815
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Entry
124453815 CDS
T08024
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04120
Ubiquitin mediated proteolysis
xen04140
Autophagy - animal
xen04144
Endocytosis
xen04517
IgSF CAM signaling
xen04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124453815
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124453815
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124453815
04140 Autophagy - animal
124453815
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124453815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124453815
04121 Ubiquitin system [BR:
xen04121
]
124453815
Enzymes [BR:
xen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124453815
Membrane trafficking [BR:
xen04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124453815
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
124453815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
Sina_ZnF
zf-TRAF
Filament
zf-TRAF_2
CEP135_TSGA10_CC
Motif
Other DBs
NCBI-GeneID:
124453815
NCBI-ProteinID:
XP_046860617
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MLREKLNSGHEKECPKANIFCEYRNIGCKWSGQRHQVQHHLNSDMKEHLSLMNVALASLL
SANGRERNRPASRTEASTSAGASSSNAADTVDRNLEEFSRPVKRNNDEINALMLRTEQIE
RSFRDLTARVDRQHRENEAGLTSVKNTIVDLEARMCNGVYLWRITNYPRHRENARENVVT
ALHSPPFYTSFYGYKLCLRINPNGVDTGYGSHVSLFVHMMQTEWDDTLEWPFSGRISLSI
LDQSDDGDYKRHISETLVTRPNLLAFQRPTTPRNHKGYGYVEFAQAETLQDRQYLKNDCL
LIRVQVFQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgagaaaaattgaattctggtcacgagaaggaatgtccgaaagcaaacattttt
tgtgaatatcgaaatattggatgcaagtggtcgggtcaaagacatcaagtgcaacaccat
ctaaacagtgacatgaaggagcatttatctctgatgaatgttgccttggctagtttattg
tctgcaaatggccgcgaaaggaatcgaccagcctctagaacagaagccagtacgagtgct
ggcgcgagcagcagcaatgctgcagatacggtcgacagaaacttggaggagttcagccgc
cctgtcaaaagaaataacgatgaaattaacgcgttgatgttgagaactgaacaaattgaa
cgatcttttcgagatcttaccgcacgtgttgacagacagcatagagaaaatgaagcaggt
ttgactagtgttaagaacacgatagttgatttggaagcacggatgtgtaatggcgtctat
ctttggaggatcacgaactaccctcgccatcgggaaaatgcaagagaaaacgttgtgaca
gctttacacagtcctcctttttacaccagcttctatggatacaaattgtgcttgagaatc
aacccaaatggagtagatactggctatggttctcacgtgtctttgtttgttcacatgatg
caaactgagtgggatgatacgcttgaatggcctttctcaggacgaatttctttatccatt
ctcgaccaaagcgatgacggtgattataaacgtcacataagtgagacattagtcacaaga
ccaaacctactagcatttcagcgaccaacaacgcctcgcaatcacaagggttatggttat
gttgagtttgctcaggccgaaacgctacaagaccgacagtacctaaaaaatgactgtctt
ttgattcgtgtccaagtatttcaataa
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