Xenia sp. Carnegie-2017 (soft corals): 124457014
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Entry
124457014 CDS
T08024
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124457014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-Nse
zf-C3HC4_4
CT398_CC
Sina_ZnF
zf-RING_6
zf-RING_16
zf-C3HC4_5
zf-RING_4
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
124457014
NCBI-ProteinID:
XP_046863269
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MATNQDGPGGHNIEFLQDLDTRLKCSICKLPLRNPHQTSCGHRFCESCIKNVIENGDQKC
PEDGTVLTLEDIFPDTFCNREILDQHCYCRNKSLGCKWTGMFRAEKDHQKECLYVEQTCP
NNGCELRLLRRDLEEHMAKDCKFKKIPCQYCGIRLSNELLNEHLETTCPNFPLDCPKMCG
QKVLLCNMETHFLNDCPKAESSCPLFPDCNFQGSRSDLKKHMSEKQITHVTMLNGYIKTL
DGHVKQLETSTTAITEIQSSVDEQLKNHHKEIVKFHGDLEALRASHGGSSSFRAAESSQA
NENMSRGAGKPDEKPRDNTIHDQAEIDNIKRHLSKLEEQVASFILRERHSFNRVQFGGGD
DETVSDLERRIASLEHQNSLSDVQIADHDVKLNMLDSTSYEGTFIWKIEDFGRISNDAQT
GRSLSIYSPQFYVGRYGYKACARVYPNGDGMGKNTHLSLFFVLMRGNYDALLTWPFRQKV
TFKLIDQNGDQHIVDSFRPDPNSSSFQRPRSNMNIASGCPLFVPKSALQRGGYIRDDTVF
IKITVDTTGLNLY
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatcaagatggtccaggtggacataacatcgagtttttacaagacctcgat
actcgactgaaatgttcaatttgtaaactccctttgaggaatccgcaccaaacttcttgt
ggtcatcgtttttgcgagagttgcattaaaaatgttattgagaacggggaccaaaagtgt
ccagaagacggcactgtacttactctcgaagatatattcccagatacattttgtaaccgt
gaaattttggaccaacattgttattgccgcaacaaaagtttgggttgtaagtggacggga
atgtttagagcagaaaaggatcatcaaaaagaatgtttatacgtggaacagacctgtcca
aataatggttgtgaattgcgattattgcggcgtgatcttgaagaacatatggcaaaggat
tgtaaattcaaaaagattccttgtcaatattgtggcattcgactatcaaatgagctttta
aatgaacatcttgaaacaacgtgtccaaattttcctttggattgcccaaaaatgtgtggt
cagaaagtgttgctttgtaatatggaaactcatttcctaaacgattgtcctaaggcggaa
agttcttgtcctttgtttcccgattgcaattttcagggttcaagatcagatcttaagaag
cacatgtctgaaaaacagatcacccatgttaccatgttgaatggctatataaaaacgtta
gatggacatgtgaagcagctggaaacatcgacaacagctataacggaaatacaatcaagt
gttgatgaacagttgaagaaccatcataaagaaattgtcaaatttcatggcgatcttgag
gccttacgtgcttcgcatggggggagttcatcatttagagcagcagaaagttcacaagcc
aacgaaaatatgtcacgtggtgcaggcaaacccgacgagaaaccacgtgataatacaatt
catgatcaagctgaaattgataacataaaaagacacttaagtaaactggaagagcaagtt
gctagtttcattttgagggagcgtcactcttttaatcgagtacagttcggtggtggcgat
gatgaaacagtatcagatcttgagagacggattgcttccttagaacatcaaaactcgttg
agtgacgtccagattgctgatcacgacgtaaaactgaatatgttagatagtacatcttat
gaaggcactttcatttggaagattgaagattttggacgaatatcaaatgatgcacaaaca
ggacgttccctatcaatctatagtccacagttctacgttggccgttatggatacaaggca
tgcgcgagagtatacccaaacggtgatggaatgggaaagaacacacatctatctcttttc
tttgtgctcatgcgtggtaattacgatgccctattgacttggccatttcgacagaaagta
acttttaaattaattgatcagaatggagaccagcatatcgttgacagctttcgaccagat
ccaaacagctcaagttttcaacgacccagaagtaacatgaatattgccagcggttgtcct
ctctttgtacctaaatctgcgcttcaaaggggcggttacatacgggacgatacggtgttc
ataaagattaccgttgataccacaggattgaatctatattga
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