Xylella fastidiosa 9a5c: XF_0793
Help
Entry
XF_0793 CDS
T00033
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa00300
Lysine biosynthesis
xfa00550
Peptidoglycan biosynthesis
xfa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XF_0793
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XF_0793
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfa01011
]
XF_0793
Enzymes [BR:
xfa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
XF_0793
Peptidoglycan biosynthesis and degradation proteins [BR:
xfa01011
]
Precursor biosynthesis
Amino acid ligase
XF_0793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AAF83603
UniProt:
Q9PF85
LinkDB
All DBs
Position
742696..744183
Genome browser
AA seq
495 aa
AA seq
DB search
MRRSMPLAQLLPDIPQARDVVISGLVMDSREVQPGDAFVAVAGFGAHGLCFIEDACARGA
VAILFEPPAPQGVSVPDGAIAVHGLRARLGAMADRFHGHPSQAMTMVGVTGTNGKTSTVQ
LLAQAWHCLGVRSATCGTLGVGLYDQVVPTGFTTPLVLQLHQCLAQLRDEGAQAVAMEVS
SHALDQGRVDGVHYDVVVFTNLTRDHLDYHGDMEHYGAAKARLFAHQDVQAAVINVDDPF
GLRLLHGLAKGMRRVGVSVCGHTDADVMAQHLSLNLQGIGFDLVIGADHASVRSPLMGRF
NVDNLLAVAGVLYALNYALSEIAAVLSTLRPIHGRMNRLGGQDGQPVVVVDYAHTPDALG
QVLSSLSSHVCGRLICVFGCGGERDRGKRSQMAVIAESNADVVFVTDDNPRGEDGDGIVA
DILAGFARPNVVKVQRDRSAAIAAAIGIASAEDVVLIAGKGHERYQEVAGVRHPFDDTEV
ARRVLAAMSAQETVR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgttctatgccattggcgcagctattgcccgatattccgcaagcgcgtgatgtc
gtgatctctggtttggtgatggatagccgtgaggtgcagccgggtgatgcgtttgtcgcg
gttgcagggttcggcgctcacgggttgtgttttattgaggatgcgtgtgccagaggtgct
gttgcaattttgtttgagccgcccgcaccgcagggggtgtcggtgccggatggggcgatt
gcagtgcatggtttgcgtgcgcgtttgggtgcgatggcggatcgcttccacggccatccg
tcgcaggcgatgaccatggtgggtgtcactggcaccaatggtaagacgtccactgtgcaa
ttgttggcgcaggcttggcattgtctaggcgtgcgcagtgcgacctgtggcacgctcggt
gtgggtttgtacgatcaggtggtaccaacgggtttcacgacgccgctggtattgcaactg
catcagtgtctggcgcagctgcgtgacgagggtgctcaggcggtggcgatggaagtcagt
tcgcacgcccttgatcaagggcgtgtggacggtgtgcattatgacgtggtggtgttcacc
aatctgacgcgtgatcatcttgattatcacggtgacatggagcactacggtgcggccaag
gcgcgcctattcgcgcatcaggatgtgcaggcggcggtaatcaatgtggatgacccattc
ggtctgcgtctgttgcatggtttggccaaggggatgcggcgggttggagtcagcgtgtgt
ggtcacacggatgcagatgtgatggcgcagcatctgagtctgaatcttcagggtatcggg
tttgatcttgtcatcggtgcggatcatgcttcggtgcgttcacctctgatgggacgtttc
aacgttgataatctgcttgcggtggcaggtgttctttatgcgctgaattacgcgctgtcc
gagattgctgcggtgctgtcgacgttgcggccgattcatggccggatgaatcgtttgggt
ggtcaggatgggcagcctgtggtggtggttgattacgcacatacccctgatgcgctgggg
caggtgttgtccagtttgagtagccacgtatgcggtcgtttgatttgtgtgtttggctgt
ggcggtgagcgcgataggggtaagcgttcacagatggctgttattgccgagagtaacgcc
gatgttgtgttcgtgaccgatgataatccgcgtggtgaggatggtgatggcattgttgct
gacattctggccggttttgcgcgtcccaacgtcgtaaaagtgcagcgcgaccgctctgct
gcgattgcggcagccattggtatagccagtgcagaggatgttgtgttgattgctggcaaa
ggtcacgagcgatatcaggaggttgctggggtgcgtcatccgttcgatgacactgaagtt
gctaggcgtgtgctggcagcaatgtcggcccaggagactgtccggtga
DBGET
integrated database retrieval system
