Xylella fastidiosa subsp. fastidiosa GB514: XFLM_01955
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Entry
XFLM_01955 CDS
T01979
Name
(GenBank) pyridoxal-5'-phosphate-dependent protein beta subunit
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff00260
Glycine, serine and threonine metabolism
xff00270
Cysteine and methionine metabolism
xff00670
One carbon pool by folate
xff01100
Metabolic pathways
xff01110
Biosynthesis of secondary metabolites
xff01230
Biosynthesis of amino acids
Module
xff_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XFLM_01955
00270 Cysteine and methionine metabolism
XFLM_01955
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XFLM_01955
Enzymes [BR:
xff01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
XFLM_01955
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
HisG_C
Motif
Other DBs
NCBI-ProteinID:
ADN62394
LinkDB
All DBs
Position
complement(403758..405128)
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AA seq
456 aa
AA seq
DB search
MVIHSSVLELIGNTPIIKAQRLDTGLCDLFLKLESANPGGSIKDRVGLSMIEAAECRGHI
KPGATLVDGAASSTSMGLAFVARQKGYRLILVVPDNMAWEKISNLKAMGAEVILTRSDVS
KGHPEHYQDLAEKLAAETPGAYFINQFGNADNPAAHEFGTGPEILKQMGGHVDAVVLGCD
SAGTITGLSRAFDSVASDVELILADPVGSILTQYINEGTRSDKSGTWLVEGIGSDCLPPI
SDFRRIKKTYAISDAESFHTARELLSKEGILGGSSTGTVLAAALKYCREQIEHKRVLVFV
CDTGNKYLLNMYNDDWMLDNGFLKRPHYGDLRDLILHPYSQRHTVVVDPNDLLTVAYQRM
KRYGVSQLPVIEDRQLVGILDESDVLLHVYGDETRFCDPVSTAMVSKLHRLDVKSPIEAL
LPVFERGQVAIVMEDDQFLGLITRIDLLNYLRRRIQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggtcattcattcttccgtacttgaattgattggtaatacgccgattatcaaggcgcag
cgccttgacactggtctctgtgatttatttttgaagcttgaaagcgctaatcctggtggt
tcaatcaaggatcgtgtgggcttgtcgatgattgaggcggctgagtgccgtggtcatatc
aagccgggtgctacgttggttgatggggctgccagcagtaccagtatgggcttggctttt
gtagctcggcagaagggttatcgcctgatccttgttgtaccggacaacatggcttgggaa
aagatttctaatcttaaggctatgggggcggaagtgatattgacccgctcagatgtcagc
aagggtcatccagagcactaccaagatttggctgaaaaactggcagccgagacaccagga
gcctacttcattaatcagtttggaaatgcggacaatccagctgcgcatgagttcggtact
ggtccggagattctgaagcagatgggcggtcatgtggatgcggttgtattaggttgcgat
agtgctggcaccatcacaggcttgtcgcgggcattcgactcagttgcttctgatgtcgaa
ttgattttggccgatccggttggttctattcttacccagtacatcaatgagggaacacgt
agtgataagtctggtacttggttggttgaagggattggaagtgattgtttgcctccgatt
tccgacttcaggcggatcaaaaaaacgtatgcgatcagtgatgcggagagctttcacact
gcacgtgagttgttgagtaaagaggggattctgggaggttcttcaacaggtactgtgttg
gctgcggcattgaaatactgccgtgagcagattgagcacaagcgtgtattggtgtttgtt
tgcgacacgggaaacaagtatttgttaaatatgtataacgacgattggatgttggataac
ggttttttgaaaaggccacattatggtgatttgcgtgatctgatcctgcatccttacagt
cagcgtcatactgttgtggttgatcccaatgatttgctgactgtggcttaccagcgtatg
aagcgatacggtgtttcacagttgccagtgattgaggacagacagttggtcggtatcctt
gatgaaagcgatgtgctgttacatgtctatggtgatgagactcggttttgtgaccctgtt
tctaccgcgatggtcagtaaacttcaccgattggatgtgaagtcgccgattgaggcgtta
ctccctgtgtttgagcgaggccaagtggctatagtgatggaagatgatcagtttttgggc
ctgattacacgcattgatttattgaattacctgcgtcgtcgtatccaatga
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