Xylella fastidiosa M12: Xfasm12_2052
Help
Entry
Xfasm12_2052 CDS
T00677
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00300
Lysine biosynthesis
xfm00550
Peptidoglycan biosynthesis
xfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Xfasm12_2052
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Xfasm12_2052
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfm01011
]
Xfasm12_2052
Enzymes [BR:
xfm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Xfasm12_2052
Peptidoglycan biosynthesis and degradation proteins [BR:
xfm01011
]
Precursor biosynthesis
Amino acid ligase
Xfasm12_2052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACA12918
LinkDB
All DBs
Position
complement(2152585..2154060)
Genome browser
AA seq
491 aa
AA seq
DB search
MPLAQLLPDIPQARDVVISGLVMDSREVQPGDAFVAVAGFGAHGLCFIEDACARGAVAIL
FEPPAPQGVSVPDGAIAVHGLRARLGAMADRFHGHPSQAMTMVGVTGTNGKTSTVQLLAQ
AWHRLGVRSATCGTLGVGLYDQLVPTGFTTPLVLQLHQCLGQLRDDGAQAVAMEVSSHAL
DQGRVDGVHYDVAVFTNLTRDHLDYHGDMEHYGAAKARLFAHQDVQAAVINVDDLFGLRL
LHGLAKGVRRVGVSVCGHTDADVMAQHLSLNLQGIGFDLVIGADRAPVRSPLMGRFNVDN
LLAVAGVLYALDYALSEIAAVLSTLRPIHGRMNRLGGQDGQPVVVVDYAHTPDALGQVLS
SLSSHVCGRLICVFGCGGERDRGKRSQMAVIAESNADVVLVTDDNPRGEDGDGIVADILA
GFVRPNLVKVQRDRSAAIAAAVGIASAEDVVLIAGKGHERYQEVAGVRHPFDDTEVAMRV
LAAMSAQETVR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgccattggcgcagctattgcccgatattccgcaagcgcgtgatgtcgtgatctctggt
ttggtgatggatagccgtgaggtgcagccgggtgatgcgtttgtcgcggttgcagggttt
ggcgctcacgggttgtgttttattgaggatgcgtgtgccagaggtgctgttgcaattttg
tttgagccgcccgcaccgcagggggtgtcggtgccggatggtgcgattgcagtgcatggt
ttacgtgcgcgtctgggtgcgatggcggatcgtttccatggccatccgtcgcaggcgatg
accatggtgggggtcactggcaccaatggtaagacgtccactgtgcagttgttggcccag
gcttggcatcgtctgggtgtgcgcagtgcgacctgtggaacgctcggtgtgggtttgtac
gatcagctggtaccgacgggtttcacgacgccgctggtattgcaattgcatcagtgtctg
ggacaactgcgtgatgatggtgcgcaggcggtggcgatggaagtcagttcccacgctctt
gaccagggacgcgtggatggcgtgcattatgacgttgcggtgttcaccaatctgacgcgc
gatcatcttgattatcacggtgacatggagcactacggtgcggctaaggctcgcttgttc
gcgcatcaggatgtgcaggcggcggtgatcaatgtggatgatcttttcggtttgcgtctg
ttacatggtttggccaagggggtgcggcgggttggagtcagcgtgtgtggtcacacggat
gcagatgtgatggcgcagcatctgagtctgaatcttcagggtatcgggtttgatcttgtc
atcggtgcggatcgtgcgccggtgcgttcacctctgatgggacgtttcaacgttgataat
ttgcttgcggtagcaggtgttctttatgcgctggattacgcgctgtctgagattgctgcg
gtgctgtcgacgttgcggccgattcatggccggatgaatcgtttgggtggtcaggatggg
cagcctgtggtggttgttgattacgcacatacccctgatgcgctggggcaggtgttgtcc
agtttgagtagccatgtatgcggtcgtttgatttgtgtgtttggctgtggcggtgagcgc
gataggggtaaacgttcacagatggctgttattgccgagagtaacgccgatgttgtgttg
gtgaccgatgataatccgcgtggtgaggatggtgatggcattgttgctgacattctggcc
ggttttgtgcgtcccaacctcgtaaaagtgcagcgtgaccgctctgctgcgattgcggca
gccgttggtatagccagtgcagaggatgttgtgttgattgctggcaaaggtcacgagcga
tatcaggaggttgctggggtgcgtcatccgttcgatgacactgaggttgctatgcgtgtg
ctggcagcaatgtcggcccaggagactgtccgatga
DBGET
integrated database retrieval system
