Xanthomonas fragariae: BER92_03755
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Entry
BER92_03755 CDS
T04667
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00300
Lysine biosynthesis
xfr00550
Peptidoglycan biosynthesis
xfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BER92_03755
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BER92_03755
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfr01011
]
BER92_03755
Enzymes [BR:
xfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BER92_03755
Peptidoglycan biosynthesis and degradation proteins [BR:
xfr01011
]
Precursor biosynthesis
Amino acid ligase
BER92_03755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Scaffolding_pro
Motif
Other DBs
NCBI-ProteinID:
AOD14002
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All DBs
Position
836184..837671
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AA seq
495 aa
AA seq
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MSRSMPLSQLLPEVTLAHDVQVSGLVMDSRAVSPGDAFVAIAGFGAHGLDFVEQARVNGA
AVVLFEPPAPADLPAPADAIAVPGLRARLGVMANRFHGQPSHAMRMVGVTGTNGKTSTVQ
LLAQALTLLGTPTGTLGTLGVGLYGTAVPTGFTTPLVLQTHALLAQLRDEGAQAVAMEVS
SHALDQGRVDAVQFDVAVFTNLTRDHFDYHGDMAQYGAAKAKLFTRAGLKAAVVNLDDAF
GRSLFASLDPALRVIGVSSRAHADAAVCAQALQLDHNGINFALHIDGHVHPVHSPLLGRF
NVDNVLAVAGVLYTLDVAPPQIAEVLGQLQPIHGRMNRLGGAHGAPLVVVDYAHTPDALE
QALTSLRSHAQGKVICVFGCGGERDTGKRPQMAAIAEINADVAIVTDDNPRCEDGEVIVA
DILRGFARPDAAIVQRDRAAAIHQAIGMAGASDIVLIAGKGHEPYQEVAGVRHAFDDALV
AAQALLPRSVLEMRA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgctccatgccgctgtcgcagctgctgcccgaggtgacgcttgcgcatgacgtg
caggtgtccggcctggtgatggacagccgtgcggtaagtccgggcgatgccttcgtggcg
atcgccggcttcggtgcgcacggtttggacttcgtcgagcaggcgcgcgtcaacggtgca
gctgtggtgttgttcgaaccgccagcgcccgctgatctgcctgcaccggccgatgcgatc
gcagtgcctggcttgcgcgcccgccttggcgtgatggccaatcggttccacggtcagcct
tcgcatgcaatgcgcatggttggcgtgaccggtaccaacggcaagacctccaccgtgcag
ttgctggcgcaggcgttgacgctgctcggcactcccaccggcactcttggcaccttgggt
gtcggtctgtatggcaccgccgtgccgaccggtttcaccacgccgctggtgctgcagacg
catgcgctattggcgcagttgcgcgatgaaggcgcgcaggccgtggcgatggaagtgagt
tcgcacgcgctcgaccagggccgcgtcgatgcggtgcagttcgatgtggcggtattcacc
aatctcacccgcgatcacttcgattaccacggcgacatggcgcagtacggcgcggccaag
gccaagctgttcacgcgcgctggattgaaggccgcggtggtgaatctggacgatgcattc
ggccgcagcctattcgcttcgctcgaccccgcgctgcgtgtgatcggtgtgagttcgcgc
gcgcacgccgatgccgcggtgtgtgcgcaggcgctgcaactggaccataacggcatcaat
ttcgcgctgcacatcgacggccacgtgcacccggtgcactcgccgttgctgggtcgcttc
aacgtggacaacgtgctggccgtagccggcgtgttgtatacgctggacgttgcgccgccg
cagattgccgaggtgctgggccagctgcagccgatccacggccgcatgaatcggctcggt
ggcgcgcatggcgcaccgctggtagtggtcgattacgcacacacgcccgatgcgctggag
caagcgctgaccagcttgcgctcgcatgcgcagggcaaggtgatctgcgtgttcggttgc
ggcggcgaacgcgataccggcaagcgtccgcagatggcggcgatcgccgagatcaatgcc
gatgtggcgatcgtcaccgacgacaacccgcgttgcgaagatggcgaggtgatcgtggcc
gacatcctgcgtggctttgctcgcccggatgccgccatcgtgcagcgcgatcgcgctgcc
gcgatccatcaggccatcggcatggccggcgcgtccgacatcgtgttgattgcaggtaaa
ggccacgagccgtatcaggaagtcgccggtgtgcggcatgccttcgacgacgccttggtg
gcagcgcaggcgttgttgccacgcagcgtgctggagatgcgcgcatga
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