Xanthomonas citri pv. fuscans: XFF4834R_chr29310
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Entry
XFF4834R_chr29310 CDS
T03094
Symbol
nth
Name
(GenBank) putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XFF4834R_chr29310 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfu03400
]
XFF4834R_chr29310 (nth)
Enzymes [BR:
xfu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XFF4834R_chr29310 (nth)
DNA repair and recombination proteins [BR:
xfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XFF4834R_chr29310 (nth)
Prokaryotic type
XFF4834R_chr29310 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
CDF62396
UniProt:
A0AB34Q8N9
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All DBs
Position
3366366..3367076
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AA seq
236 aa
AA seq
DB search
MNIPQTTAPARRGSSMRKPEIQEMFARLRELNPHPTTELEYTTPFELLIAVLLSAQATDV
GVNKATRKLYPVANTPRDILDLGEEGLKRYISTIGLFNAKAKNVIATCRILLERYGGDVP
HDRAALEALPGVGRKTANVVLNTAFGEPAMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVK
VVPAEFLHDAHHWLILHGRYVCKARGPDCPGCVIHDLCRYRDKTPPAPERQAKTRS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacctcagacaacggcgccggcgcgtcgtggcagcagcatgcgcaagcccgag
atacaggaaatgttcgcgcgcctgcgcgaactcaatccgcaccccaccaccgagttggaa
tacaccaccccattcgagttattgatcgcggtgctgctgtcggcgcaagccaccgatgtc
ggcgtcaacaaggcgacccgcaagctatatccggtggccaataccccgcgcgacattctc
gatctcggcgaagaaggcctgaagcgatatatctccaccatcggcctgttcaacgccaag
gccaagaacgtcatcgccacctgccgcatcctgctggagcgctatggtggcgacgtgccg
catgatcgcgccgcgctggaagcgctgcccggcgttggccgcaagaccgcaaacgtggtg
ctcaacaccgccttcggcgagcccgccatggccgtggacacgcatatctttcgcgtttcc
aaccgcaccggtcttgcgccaggcaaggacgtgcgcgcggtcgaagacaagttggtcaag
gtggttccggccgaattcctgcacgatgcgcatcactggctgatcctgcacggacgctac
gtctgcaaggcacgcgggccggattgcccgggctgcgtgatccacgatctatgccgctat
cgcgacaagacgccgccggcccctgagcggcaagcaaaaaccaggagttga
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