KEGG   Xanthomonas hortorum pv. gardneri: BI317_05825
Entry
BI317_05825       CDS       T04668                                 
Name
(GenBank) malate dehydrogenase
  KO
K00024  malate dehydrogenase [EC:1.1.1.37]
Organism
xga  Xanthomonas hortorum pv. gardneri
Pathway
xga00020  Citrate cycle (TCA cycle)
xga00270  Cysteine and methionine metabolism
xga00620  Pyruvate metabolism
xga00630  Glyoxylate and dicarboxylate metabolism
xga00680  Methane metabolism
xga00710  Carbon fixation by Calvin cycle
xga00720  Other carbon fixation pathways
xga01100  Metabolic pathways
xga01110  Biosynthesis of secondary metabolites
xga01120  Microbial metabolism in diverse environments
xga01200  Carbon metabolism
Module
xga_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xga_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xga_M00012  Glyoxylate cycle
xga_M00168  CAM (Crassulacean acid metabolism), dark
xga_M00982  Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:xga00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    BI317_05825
   00620 Pyruvate metabolism
    BI317_05825
   00630 Glyoxylate and dicarboxylate metabolism
    BI317_05825
   00566 Sulfoquinovose metabolism
    BI317_05825
  09102 Energy metabolism
   00710 Carbon fixation by Calvin cycle
    BI317_05825
   00720 Other carbon fixation pathways
    BI317_05825
   00680 Methane metabolism
    BI317_05825
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    BI317_05825
Enzymes [BR:xga01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.37  (S)-malate dehydrogenase (NAD+, oxaloacetate-forming)
     BI317_05825
SSDB
Motif
Pfam: Ldh_1_C Ldh_1_N DUF7250 Glyco_hydro_3_C TPP_enzyme_M
Other DBs
NCBI-ProteinID: APP83781
LinkDB
Position
1274723..1275709
AA seq 328 aa
MKAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVIMELE
DCAFPLLAGVVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNK
VAKRDVKVLVVGNPANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLSQKLGKPVGGI
EKLVVWGNHSPTMYPDYRFATSDGASIGDAINDQEWNASTFIPTVGKRGAAIIEARGLSS
AASAANAAIDHVRDWVLGSDGKWVTMGVPSDGSYGIPEGVIFGFPVITANGEYTLVKDLP
IDDFSQKYIDKTLAELEEERSGVSHLLG
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaaagcacctgttcgtgttgccgtgaccggcgctgccggccagatcggctatgccctg
ctgttccgcatcgcctccggcgaaatgctgggcaaggatcagccggtgatcctgcaattg
ctggaactgtccaatgaaaaagcccaggccgcgctcaagggcgtgatcatggagctggaa
gactgcgcattcccgctgctggccggcgtggtcggcaccgacgacgccgaagtggcgttc
aaggacatcgacgttgcgctgctggttggcgcgcgtccgcgcggcccgggcatggagcgc
aaggacctgctgctggagaacgccaagatcttcaccgcgcagggcgctgccctgaacaag
gtcgccaagcgtgacgtcaaggtgctggtggtcggcaacccggccaacaccaatgcctac
atcgcgatgaagtcggcgccggatctgaacccgaagaacttcaccgccatgctgcgtctg
gaccacaaccgtgcgctgagccagctgtcgcaaaagctcggcaagccggtcggtggtatc
gagaagctggtggtgtggggcaaccacagcccgaccatgtacccggactatcgtttcgcc
acctccgatggcgcctccatcggcgatgcgatcaacgaccaggaatggaacgcgtccacc
ttcatcccgaccgtaggcaagcgcggcgcggcgatcatcgaagcacgcggcctgtcctcg
gctgcgtcggccgccaatgccgccatcgatcacgtgcgtgattgggtgctgggcagcgac
ggcaagtgggtgacgatgggcgtgccgtccgacggctcctacggcattcccgaaggcgtg
atcttcggcttcccggtgatcaccgccaatggcgagtacaccctggtcaaggatctgccg
atcgacgacttcagccagaagtacatcgacaagaccctggccgagctggaagaagagcgc
agcggcgtgtcgcatctgctgggctga

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