Xanthomonas hortorum pv. gardneri: BI317_16400
Help
Entry
BI317_16400 CDS
T04668
Name
(GenBank) multidrug efflux RND transporter permease
KO
K18138
multidrug efflux pump
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
Transporters [BR:
xga02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
BI317_16400
Antimicrobial resistance genes [BR:
xga01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BI317_16400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
APP85520
LinkDB
All DBs
Position
complement(3521101..3524244)
Genome browser
AA seq
1047 aa
AA seq
DB search
MARFFIDRPIFAWVLAIIVMLAGILSIATLPIAQYPSIAPPAVAITANYPGASAQTLEDT
VTQVIEQKMKGLDHLSYMASTSESSGAVTITLTFDNGTDPDTAQVQVQNKLSLATPLLPQ
EVQQQGVTVTKSATNFLNVLAFTSEDGSMSDSDLSDYVAANVQETISRVEGVGDTTLFGS
QYAMRVWMDPNKLNNFSLTPVDVRTAIQAQNAQVSAGQLGALPAVANQQLNATITAQTRL
KTAEQFENILLRTQSDGAQVRLRDVARIELGSESYNTVGRYNGKPAAGLAIKLATGANAL
DTVRAIDKSLEEQEKFFPPGMKVQKPYDTTPFVRISIEQVVHTLIEAVVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFGVLAVFGFTLNTLTMFAMVLAIGLLVDDAIVVVENVERVM
GEEHLSPKEATRKSMDQISGALVGVALVLAAVFVPMAFFGGSTGVIYRQFSITIVSAMTL
SVLVAMILTPALCATLLKPVEKGHGLATTGFFGWFNRVFDRGNNRYQGVVRHMLGKGWGY
MLAYAALLALVVFGFMKLPVGFLPDEDQGTLFVLVQLPPGATDARTGEVLKQVEHHFLVD
QKDSVAGVFAVSGFSFAGSGQNTGLAFVKLRPWDERTGKGQSVTDVAAKAGAFFAGIRDA
RVFAFAPPAVSELGNATGFDLMLQDRANLGHEALMQARNQLLGELSQDKRLVAVRPNGQE
DTPEFKLEIDSHKAQAMGVSIADINNTFSSAWGSTYVNDFIDKGRVKKVMLQADAVYRMN
PQDIDRWFVRNSAGTMVPFNAFATASWQSGSPRLERYNSVPSVEILGMALPGAASSGEAM
QIVEAAAAKLPPGIGFEWTGLSRQEKSSTGQTGLLYGLSILIVFLCLAALYESWAIPFSV
ILVVPLGVFGTLLGAMLTWKMNDVYFQVGLLTTIGLASKNAILIVEFAKELHESGKSLIE
SALEAARMRLRPILMTSLAFILGVVPLVLGSGAGAGAQHALGTAVIGGMLSGTILAILFV
PLFFVLVMGLFKRRPQPTSPAPQPTGH
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcttctttatcgatcgtccgatcttcgcctgggtgttggccatcatcgtgatg
ctggccggcatcctgtccatcgccaccttgccgattgcgcagtaccccagcatcgcaccg
cccgccgtcgccatcaccgccaactacccgggcgcttcggcgcagaccctggaagacacc
gtcacccaggtcatcgagcagaagatgaaggggctggaccacctcagctacatggcctcc
accagcgaatccagcggtgcggtgaccatcacgctgaccttcgacaacggcaccgatccg
gacaccgcgcaggtgcaggtgcagaacaagttgtcgctggccaccccgttgttgccgcag
gaagtgcagcagcagggcgtgacggtgaccaagtcggccaccaacttcctcaacgtgctg
gccttcacttccgaagacggcagcatgagcgattcggacctgtccgattacgtggcggcc
aacgtgcaggaaaccatcagccgcgtcgaaggcgtgggcgacaccaccttgttcggctcg
cagtacgccatgcgggtgtggatggaccccaacaagttgaataatttcagcctgaccccg
gtggatgtccgcaccgcgatccaggcgcagaacgcgcaggtctcggcgggccagctgggt
gcgttgccggcggtggccaatcagcaactcaatgccaccatcactgcgcaaacccggctc
aagacggccgagcagttcgaaaacatcctgctgcgcacgcagtccgatggcgcgcaggtg
cggttgcgcgatgtggcgcgcatcgaactgggtagcgagagttacaacacggtgggccgc
tacaacggcaagccggcggccggtctggcgatcaagctggccaccggtgcgaacgcactg
gataccgtgcgcgccatcgacaaaagcctggaagagcaggagaagttcttcccgcccggc
atgaaggtgcaaaagccgtacgacaccaccccgttcgtgcggatctccatcgagcaggtg
gtgcacacgctgatcgaagcggtggtgctggtgtttctggtgatgtatctgtttctgcag
aacttccgcgcgaccttgatccccaccattgcggtgccggtggtgttgctgggcacgttc
ggggtgctggcggtgttcggtttcaccctcaatacgctgaccatgttcgcgatggtgctg
gcgatcggtttgctggtggacgatgcgatcgtggtggtggaaaacgtcgagcgtgtgatg
ggcgaagaacacctgtcgcccaaggaagccacgcgtaaatcgatggaccagatctctggt
gcgctggtgggcgtggcgttggtgctggcggcggtgttcgtgccgatggcgttcttcggt
ggctccaccggtgtgatctatcggcagttctcgatcacgattgtgtctgccatgaccttg
tcggtgctggtggcgatgatcctgactccggccttgtgcgcgaccttgctcaagccggtg
gaaaaaggccatggcctggccaccaccggtttcttcggctggttcaaccgcgtgttcgat
cgcggcaacaaccgctaccagggcgtggtgcggcacatgctgggcaagggctgggggtac
atgcttgcctatgccgcgttgctggcgttggtggtattcggcttcatgaaattgccggtg
gggtttttgccggacgaagaccagggcacgctgttcgtgctggtgcagttgccgcccggt
gccaccgatgcgcgcaccggtgaggtgctcaagcaggtggagcatcactttctggtggac
cagaaggattcggtcgctggcgtgtttgccgtgtccgggttcagttttgccggtagcggc
cagaataccggcctggcgttcgtcaagctgcggccgtgggacgagcgcaccggcaagggg
cagagcgtcaccgatgttgcggccaaggccggtgccttcttcgccggcatccgcgatgcc
agggtgttcgcgttcgcaccgccggcggtgtccgagttgggcaatgccaccggtttcgac
ctgatgctgcaggaccgcgccaacctcggtcatgaagccttgatgcaggcgcgcaatcaa
ttgttgggcgagctgtcgcaggacaagcgcctggtggcggtacgcccgaacgggcaggaa
gacacgcccgagttcaagctggagatcgattcgcacaaggcgcaggccatgggcgtgtcg
atcgccgacatcaacaacaccttctccagcgcgtggggcagtacctacgtcaacgacttc
atcgacaaggggcgggtcaagaaggtgatgctgcaggccgatgcggtgtaccgcatgaat
ccgcaggacatcgaccgctggttcgtgcgcaacagcgccggcaccatggtgccgttcaac
gccttcgccaccgccagctggcaatcgggctcgccgcggttggagcgttacaacagcgtg
ccgtcggtggaaatcctgggcatggcgctgcccggcgcggcatccagtggtgaggcgatg
cagatcgtggaagcggcggcggccaaattaccgccgggcatcggcttcgagtggaccggg
ttgtcgcggcaggaaaaatcctcgaccggccagaccggcctgttgtacgggttgtcgatc
ctgatcgtgttcctgtgtctggccgcgttgtacgaaagctgggcgattccgttctcggtg
attctggtagtgccgctgggtgtgttcggcacgctgctgggcgcgatgctgacctggaaa
atgaatgatgtgtactttcaggtgggcctgctcaccacgattggtcttgcatcgaaaaac
gcgatcctgatcgtggagttcgccaaggaactgcatgaaagcggcaagagtctgatcgag
tcggcattggaagcggcacgcatgcgcttgcggccaatcttgatgacatcgctggccttc
atcctgggcgtggtgccgttggtgctcggcagtggtgccggtgcaggcgcacagcatgcg
ttgggtaccgcagtgatcggcggcatgttgtccggcacgattttggcgatcttgttcgtg
ccgttgttcttcgtgttggtgatgggcttgttcaagcgccgaccgcagcccacttcaccc
gccccgcaaccgacaggacactga
DBGET
integrated database retrieval system
