KEGG   Xiphias gladius (swordfish): 120783375
Entry
120783375         CDS       T07311                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03420  Nucleotide excision repair
xgl04110  Cell cycle
xgl04114  Oocyte meiosis
xgl04120  Ubiquitin mediated proteolysis
xgl04141  Protein processing in endoplasmic reticulum
xgl04310  Wnt signaling pathway
xgl04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120783375 (rbx1)
   04120 Ubiquitin mediated proteolysis
    120783375 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120783375 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    120783375 (rbx1)
   04350 TGF-beta signaling pathway
    120783375 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    120783375 (rbx1)
   04114 Oocyte meiosis
    120783375 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xgl04121]
    120783375 (rbx1)
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120783375 (rbx1)
Enzymes [BR:xgl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     120783375 (rbx1)
Ubiquitin system [BR:xgl04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   120783375 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     120783375 (rbx1)
   Cul2 complex
     120783375 (rbx1)
   Cul3 complex
     120783375 (rbx1)
   Cul4 complex
     120783375 (rbx1)
   Cul7 complex
     120783375 (rbx1)
   Cul8 complex
     120783375 (rbx1)
   Cul9 complex
     120783375 (rbx1)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120783375 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120783375 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 120783375
NCBI-ProteinID: XP_039972277
LinkDB
Position
LG3
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacgccgagcggcacaaacagtggagcaagtaaaaag
cgatttgaagtaaagaagtggaatgctgtggcgctgtgggcctgggacattgtggttgat
aactgtgctatctgtcggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacctctgaggagtgcactgtagcctggggtgtctgcaatcatgccttccat
tttcactgtatttctcgctggctgaaaaccagacaggtgtgccctctggacaacagggag
tgggagtttcagaaatacggacactag

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