Xiphias gladius (swordfish): 120785181
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Entry
120785181 CDS
T07311
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120785181
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Protocadherins
120785181
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
120785181
NCBI-ProteinID:
XP_039975577
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Position
LG23:complement(15565472..15568154)
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AA seq
844 aa
AA seq
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MSYNGPRMTKTIGYRDWRWQALWWHHFLLLWSTIDGQTRYSIPEELERGSVVGNLAKDLG
LGLSEIFDRKLRVASEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQVVVENP
LNLHRIEVEIKDINDNSPRFHTKDMSLKIAESAAVGTRFLLESAEDSDVGSNSVKSYTLT
KNDCFTLKMKEVEDGKTVPELALEKPLDREKKAVHQLLLTALDGGNPVMSGTSQIQITVL
DVNDNFPVFDKNIYKVSLLENTVKDTFVFKMTATDADDGLNGEVELSFGSRTPDSVSSVF
EINSLTGEIHLKGDLDYERDTSYKIEITAKDRGVPEMESHCRLQIDVVDVNDNSPEIVLT
SEPQTVREDAPSGTVVALLNARDADSGNNSKVTLLLPQGSPFTLKPSFSNNYALVTSGAL
DRESFSQYNIEITATDSGSPPLSSKKTIPVSITDVNDNPPIFTQPSYNVYLKENGVPGSI
LFSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQI
QVQAKDQGSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTK
VTAVDADSGHNAWISYKLAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEVKDDG
EPVQSATVTVSILLEDGLHEPILDLRQKAAEPSKKNDRITLYLILSLASVSVLSLVTFLI
LAVKCIRNSRSSGSCCMRRADCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFR
SCMSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSTETILSSLNMNYC
LAFW
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataacggaccaaggatgacaaagacaataggataccgagactggagatggcag
gcgctttggtggcatcatttccttctcttgtggagtacaatagacgggcagactcgttac
agcatcccggaggagctggaacgaggctctgtggtaggaaatctagccaaagatctgggt
ttgggactatctgagatttttgaccgtaaactacgagtcgcctccgaggctggtgagcag
tatttcagtgtggatgcggggaagggcgagctggtggtgaatgacaggatagacagagag
gctttatgcggacaaagcgccagctgtgttctacctctgcaagtagttgttgaaaatcct
ctaaatttacatcgcattgaagtagaaataaaagatatcaatgataattcgcccagattc
cacacgaaagatatgtctttgaaaattgccgaatcggcagcagtgggaactcgttttctt
ctggagagtgcggaggattcagatgttggtagtaattcagtcaaatcctacactttgact
aaaaacgactgttttacgttgaaaatgaaggaggtggaggatggcaaaacagtccccgag
ttagcgttagagaagcctcttgatcgagagaagaaagcagtccatcagctgctgttgaca
gcattagacggaggaaacccagtcatgtccggaacctcacagatccaaatcacagtgctt
gatgtaaatgataattttccagtttttgataaaaatatttataaggtttccttattggag
aatactgtaaaggatacgtttgttttcaaaatgacagcaactgatgctgatgatggtctg
aatggtgaagttgaattgtcttttggctcgcggacaccagattccgtctcatcggtattt
gagataaattcattaacgggggaaatacatttgaaaggagacttagattatgaaagagac
acatcctacaaaattgaaataaccgctaaagacaggggggttcccgaaatggagagtcac
tgtcgtctacagatagatgttgtagatgttaatgataactctccagaaattgttctcacc
tctgaaccgcagacggtgcgcgaggatgcgccaagtggcacagtggtggcgttactcaat
gcacgtgacgctgactccgggaataatagcaaagtaacattgctactaccccaaggttct
cctttcactctaaaaccatcattttctaataattacgcactggttaccagtggtgcttta
gaccgcgagagtttctctcagtataacattgagataacagccactgactcaggctcccct
cctctgtccagtaagaaaactataccggtcagcatcactgatgtgaatgacaaccctcct
atattcactcagccctcctacaatgtgtatttaaaagagaatggggtaccagggtctata
ctgttctcagtatcagcctccgacctggattttggtgaaaacgccaaaatctcgtactcc
atcctggactctaaagtgcaggacgtttctgtctcatcgtatgtttacatcaactcagat
aacggcagcatctacagcatgcactcgttcgactatgagaaactcaaggtgtttcagatt
caggttcaggcaaaggatcagggttctccgtctctcagcagcaacgccaccgtccatgtc
ttcatcctggaccagaacgacaacgcccccgctgttatttacccctcctccgctgccctg
ggctccctgtctcatcagaggatgccccgctccgctaaagcgggtcacctggttactaag
gtgacggcggtggacgctgactcgggccataacgcctggatctcctacaaactggcggag
gccacagacgcctctctgttcactgtcaatctgtacacaggggaggtgaggactaaacgc
gctgtgtccgagcaggacgactcctctcagaggctgcttatagaggtcaaggacgacggg
gaaccggtccagtccgccaccgtcacggtgtccatcctgctggaggacggtctccatgag
ccgattttagacctccgacagaaagcggccgagcccagcaagaaaaacgaccgaatcacc
ctttacttgattctctctctggcctcggtgtccgtgctgtctctggtgacttttctcatc
ttagcagttaaatgcatccggaacagcagaagcagcggtagttgctgcatgagacgggcc
gactgtgatgattacaagaaccccaacagaaacctgcagatccagctcaacaccgacgga
cctataaagtacgtggaggtcctgggaggagacatgttgtctcagagtcagtccttcagg
tcctgtatgtctccaatgtcagagtacagtgatttcacgttgattaaacccagcagcacc
actgactttaaggaggtgatcagtgtcctggatgcgtctttacctgacagcacctggacc
tttgagagccagcaggtgagcacagaaacaatactgtcttccctcaacatgaactactgt
ttggcgttctggtga
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