Xiphias gladius (swordfish): 120785642
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Entry
120785642 CDS
T07311
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120785642
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Protocadherins
120785642
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120785642
NCBI-ProteinID:
XP_039976450
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Position
LG23:complement(15571742..15574987)
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AA seq
844 aa
AA seq
DB search
MEFMERGIMSNKLPAWQFFLWWHHFLLLWSTIDGQTRYSIPEEVKQGTVVGNLAKDLGLV
VSELYRRKLRVTSEAGKQYFSMDLGKGELVVIDRIDREQLCGQRPSCLLPLELVIDNPLQ
LHRVEIEIQDANDNSPSFVTKEKVLKIAELVNAGARFPLESAQDPDVGTNSVRSYLISKN
DHFKLTVKNQKDGRKIPELVLQKPLDREKLPVHNLVLTAVDGGDPVRSGTSEITVIVLDN
NDNAPQFERNLYEANVSEKATPGAEVLHVKATDADEGLNGEIEYFFAEQTTDLILSLFDI
EPSTGAVVVKGILDHETNSLHRFDIIAKDKGNPKMDGHCGVEIKVVDINDNVPEIIVTSL
TTPVPEDSAIGTVIALISAKDPDSGDNGKVTLTVSSKYPFKLNPSVSNHYALVTKGPLDR
EKNGHYSVKISATDSGKPPLSSEKIILVELLDVNDNPPVFPQPSYVVYVKENHPPGKILF
SVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDQGSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVT
AVDADSGHNAWISYKLAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEVKDDGEP
VQSATVTVSILLEDGLHEPILDLRQKAVEPSKKNDRITLYLILSLASVSVLSLVTFLILA
VKCIRNSRSSGSCCMRRADCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSC
MSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRETNIYPGNEEIDIM
AASL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatggaacgaggaataatgtcgaacaaactgcctgcatggcagttttttttg
tggtggcatcatttcttgctcttgtggagtacaatagacggacagactcgctacagcatc
ccggaggaagtgaaacagggcactgtggtaggaaatctagccaaagatctgggtttggtt
gtatctgaactgtaccgacgtaaattgcgggtgacctcggaagctggtaagcagtatttt
agtatggacttggggaagggagaactggtggtgattgataggatagatagggagcaactg
tgtggacaaagaccgtcatgcttgttgcctttggaactagttatagataaccccctgcag
ctgcatagagtagaaattgaaatacaagatgcaaacgataattctcctagttttgtcact
aaagaaaaagtcttgaaaattgcagagctggtaaatgcaggcgcgcgatttcctttagaa
agtgcacaggatcccgatgtcggcactaattctgtacgctcttacctcataagcaaaaac
gaccatttcaagttgaccgttaaaaaccaaaaggacggaagaaaaatccccgaactggtt
ctccaaaaacctcttgatagagaaaagctgcctgtacataatcttgtactcacggctgta
gatggcggagatccggtgcgctcagggacatctgaaattacagtcatagtacttgacaat
aatgacaatgcgccacaatttgagagaaacctgtatgaggctaatgtcagcgaaaaggca
acacctggagctgaagtattgcatgttaaagctacagatgcagatgaaggactaaatgga
gaaattgaatatttttttgcagagcaaactacggatctaatattatcattatttgacatt
gaaccttctacgggagctgttgtagtcaaaggaattttagaccacgaaacaaactcttta
cacagatttgatataattgctaaagacaagggcaaccctaagatggatggacattgtggc
gttgaaattaaagtagttgacattaacgataatgttcctgagataattgtgacgtcttta
acaacacctgttccagaagattctgcaatcggaacagttattgccttaataagtgcaaaa
gacccagattcaggtgacaacggcaaggttacgttgaccgtgtcttccaaataccccttt
aaattaaatccatcggtctctaaccattacgcattagtgacgaaagggccacttgaccgt
gaaaagaatggtcattatagtgtcaagataagtgctactgattctggaaaacccccgtta
tcgagtgaaaaaattatacttgttgaattattagatgtaaatgacaacccaccagttttc
ccccagccttcttatgtcgtttatgtaaaagagaaccatcctcccgggaaaattttgttc
tcagtatcagcctctgacctggattttggtgaaaacgccaaaatctcgtactccatcctg
gactctaaagtgcaggacgtttctgtctcatcgtatgtttacatcaactcagataacggc
agcatctacagcatgcactcgttcgactatgagaaactcaaggtgtttcagattcaggtt
caggcaaaggatcagggttctccgtctctcagcagcaacgccaccgtccatgtcttcatc
ctggaccagaacgacaacgcccccgctgttatttacccctcctccgctgccctgggctcc
ctgtctcatcagaggatgccccgctccgctaaagcgggtcacctggttactaaggtgacg
gcggtggacgctgactcgggccataacgcctggatctcctacaaactggcggaggccaca
gacgcctctctgttcactgtcaatctgtacacaggggaggtgaggactaaacgcgctgtg
tccgagcaggacgactcctctcagaggctgcttatagaggtcaaggacgacggggaaccg
gtccagtccgccaccgtcacggtgtccatcctgctggaggacggtctccatgagcccatc
ttagacctccgacagaaagcggtcgagcccagcaagaaaaatgacagaatcaccctttac
ttgattctctctctggcctcggtgtccgtgctgtctctggtgacttttctcatcttagcg
gttaaatgcatccggaacagcagaagcagcggtagttgctgcatgagacgggccgactgt
gatgattacaagaaccccaacagaaacctgcagatccagctcaacaccgacggacctatt
aagtacgtggaggtcctgggaggagacatgttgtctcagagtcagtccttcaggtcctgt
atgtctccaatgtcagagtacagtgatttcacgttgattaaacccagcagcaccactgac
tttaaggaggtgatcagtgtcctggatgcgtctttacccgacagcacctggaccttcgag
agccagcaggtgagcagagaaacaaacatttatcctggtaatgaagaaatagatatcatg
gccgcgtcgctgtaa
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