Xiphias gladius (swordfish): 120788420
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Entry
120788420 CDS
T07311
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04010
MAPK signaling pathway
xgl04020
Calcium signaling pathway
xgl04510
Focal adhesion
xgl04540
Gap junction
xgl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120788420 (pdgfab)
04020 Calcium signaling pathway
120788420 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120788420 (pdgfab)
04540 Gap junction
120788420 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120788420 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xgl04052
]
120788420 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
xgl00536
]
120788420 (pdgfab)
Cytokines and neuropeptides [BR:
xgl04052
]
Cytokines
Growth factors (RTK binding)
120788420 (pdgfab)
Glycosaminoglycan binding proteins [BR:
xgl00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120788420 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
120788420
NCBI-ProteinID:
XP_039980165
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All DBs
Position
LG3:complement(14180979..14201388)
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AA seq
208 aa
AA seq
DB search
MRAALCYVLLWTAYLLLATAEEVEFPQELIDRLSHSEIHSISDLQRLLEIDSVGTGNDVI
EEPKHHKHHNHHKNYSRHHGHYNDLKSSQLHSRRKRSVVEEAVPAVCKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHSEAETVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgttacgtcctgctgtggacggcgtacctgctgctggccaccgct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactggagattgactccgtaggtacgggaaacgatgttatc
gaggagcccaagcaccacaagcaccacaaccaccataagaactactcccgtcatcacggt
cactacaatgacctgaagagctcccagctccacagcagacgcaagaggagtgtcgtagag
gaggcggtcccggcggtgtgtaagacacggacggtgatctacgagatccccaggagccag
gtggatcccacatctgccaacttcctgatatggccgccctgtgtggaggtgaagcgctgc
acgggctgttgcaacaccagcaacatgcgctgtcacccttcccgcaagcaccaccgcacc
gttaaggtggccaaggtggagtatgtgaggaggagacccaagctgaaagaagtctttgtg
cggttagaagaccacctggagtgtgtgtgcacgtcacaacatcatgtggttgagcactca
gaagcagaaacagtggatgtgaggtga
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