Xiphias gladius (swordfish): 120788779
Help
Entry
120788779 CDS
T07311
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl02010
ABC transporters
xgl04146
Peroxisome
xgl04977
Vitamin digestion and absorption
xgl04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120788779 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120788779 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
120788779 (abcd4)
04980 Cobalamin transport and metabolism
120788779 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120788779 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xgl02000
]
120788779 (abcd4)
Enzymes [BR:
xgl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
120788779 (abcd4)
Membrane trafficking [BR:
xgl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120788779 (abcd4)
Transporters [BR:
xgl02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
120788779 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_7
FtsK_SpoIIIE
AAA_5
DUF87
NACHT
nSTAND1
T2SSE
Motif
Other DBs
NCBI-GeneID:
120788779
NCBI-ProteinID:
XP_039980823
LinkDB
All DBs
Position
LG4:13143115..13152032
Genome browser
AA seq
617 aa
AA seq
DB search
MARLDRSNGSGTKRPKLDWKFVQRFCGIQRVLFPSWRSQSVLMFGTLLAVTLTEQLIIYQ
VGVLPSHFYNVLADKEYSGFRSLVGKAVVLILLNSTLKSLDQYICNQMYVSWRKTLTESL
HTAYFQGRVYYTINVLREDIDNPDQRISQDAERLCKQMSTMASRLIVSPFTLAYYTYHCF
HSTGWIGPLGIFGYFVIGTVANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFY
RAGKVEHMRTNRRLQPLLQTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGIYD
GLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELREVMDDILRKQC
DYDPASGESYDFDSDFNIHAGPVDTAFILDHLSYKSPYSDQLLVEDLSLKISQGTHLLVV
GNTGTGKTSLLRVLNRLWEAHSGFVQMTTCFGPRGTLFLPQKPYLTDGTLREQVIYPLKD
IYPASGSVDDDRIIQFLELAGVSSLLKRTGGLDEKVDWNWYDVLSPGEMQRLCFARLFYL
QPKYAVLDEATSALTEEAEAQLYRTCKQLGMTVVSLGHRSSLEKYHDVQLKLCGGGKWVL
TKLRGSSCRLNHRDETM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtctggacaggtcgaatggcagcgggacaaaaagaccaaaactggactggaag
ttcgttcagaggttctgcggcatccagagggtcctgttcccgtcatggagaagccagagt
gtcctgatgtttgggacgctgcttgccgtcaccctgacagagcagctgatcatttaccaa
gtgggtgtcctccccagtcacttctacaatgtgctggcagacaaagagtactcgggcttc
aggagcctggtgggcaaagctgtggtgctcattttgctcaactccacactgaaaagtctc
gaccagtacatttgcaatcagatgtatgttagctggaggaagacgctaactgagagcctc
catacggcctacttccagggccgagtctattacacaatcaatgtactcagagaggacata
gacaacccggaccagcggatcagtcaggatgcagagaggttgtgtaagcagatgagcacc
atggccagtcgcttgatcgtttcgccgttcacgctagcttactacacctaccactgcttt
cacagcactggctggatcggtcctttgggcatctttggctactttgtgatcgggaccgtt
gccaataaaatcctcatggggccgattgtgtcgactctgtttgagcaagaaaaactggag
ggagacttcagattcaagcacatgcaaatccgtgtcaacgcagagtctgcagctttttac
agagctggtaaagtggagcacatgaggaccaaccgaaggctgcagcctctgttacaaact
caaaagagtctaataaataaagaactctggctctatatcggggtgaacacctttgattac
ctcggaggcttcctcagctacattataatcgccatccccatcttcaccggtatctatgat
ggtctcactcccggcgagcttagtgcactcatcagtaagaacgcctttgtgtgcatctac
ttgataaatggcttcacgcagctaatagacctgtcaaccactctgtcagatgtggctgga
tacacccacaggattggggagctgagggaggtgatggacgacatcctacgcaagcagtgc
gactatgacccggcgtcaggagaaagctacgactttgacagtgacttcaatatccatgca
ggcccagtggacactgccttcatcctggaccatctttcatacaaatctccttactcagac
cagctgctggtggaggacctgagtctgaaaatcagtcagggaactcatctactggtggtg
gggaacacgggcaccggcaagacgtcactgctgagggtcctcaaccgactgtgggaggcg
cacagcggttttgtccagatgacgacatgttttgggcccagaggaaccctcttcctgccg
cagaagccgtacctgaccgatggcacactgcgcgaacaggtgatctacccattgaaggat
atttaccctgcatcagggtcagtggacgatgatagaattatacaattcctggaactagct
ggagtgtccagtctcttgaagcgaacgggcgggctggatgaaaaggtggactggaactgg
tatgatgttctgtccccaggtgaaatgcagcgtctctgctttgcacgacttttctacctg
cagcccaaatatgcagtattggacgaggccaccagtgctttgacagaggaggcagaggca
cagctgtaccggacctgtaagcagcttggcatgacagtggtcagtctgggacaccgtagc
agcctggagaagtaccatgacgtccagttgaaactgtgtggaggtggcaaatgggtgcta
actaagttaagaggaagcagctgccgcctcaatcacagagacgaaaccatgtga
DBGET
integrated database retrieval system
