Xiphias gladius (swordfish): 120794139
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Entry
120794139 CDS
T07311
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00514
Other types of O-glycan biosynthesis
xgl04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120794139 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120794139 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xgl01003
]
120794139 (rfng)
Enzymes [BR:
xgl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120794139 (rfng)
Glycosyltransferases [BR:
xgl01003
]
Glycan extension
O-Glycan
120794139 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
120794139
NCBI-ProteinID:
XP_039990799
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All DBs
Position
LG9:complement(22972728..22995773)
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AA seq
399 aa
AA seq
DB search
MHIASVVVSKFCFLFSLAFCGLLLLLIPALQPPARQVDLPQPKPQMRATQAGPSHHTRVP
AVSIHARETDTAIGLKGSSAGQGGSIKTEVTRNDKWDVDSKRGLERWAPPGRKDGGISGF
RSHDLLELKDIFIAVKTTKKYHKSRLELLIQTWVSQAKEQTYMFTDGEDKQMQMRTGANI
INTNCSAAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLRVLSSYHHTQDV
YLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAE
KIRLPDDCTIGYIIEALLEVALTHTHLFHSHLENLQKLPPDSVLEQVTLSYGGFENRRNV
VSIAGGFSLAEDPTRFKTVHCLLYPDTDWCPKLKLRKKN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcacatagcttcagtcgttgtcagcaagttctgcttcctgttttccctcgcattctgc
ggcctcctgcttctgcttatcccggccctccagcccccagctcgccaggtggacctgcct
cagcccaaaccccaaatgagagctacacaagcaggcccatcacaccacaccagggttcca
gcagtgtccatccatgccagggaaactgacacagccatagggctgaaagggagctcagcg
ggccaggggggatccatcaagactgaagttaccaggaatgataagtgggatgtagactcc
aaaagaggcctagaaagatgggctcctcctggaagaaaggatggtggaatttcagggttt
aggtcccatgacctgttagagttgaaggatatttttattgctgtgaagactactaagaag
taccacaagtccagactggagttgttgattcagacctgggtttcccaagctaaagaacag
acctacatgttcactgatggtgaggacaagcaaatgcagatgagaacaggagccaacatc
atcaacactaactgctcagcagctcacacccgacaggctctgtgttgtaagatgtctgtg
gagtacgacaaattcatcgagtctcagaaaaagtggttctgccatgtggatgatgataac
tatgtgattctgcccagcttgctgcgagtcctctcctcctaccaccatacccaggatgtc
tacctgggccggcccagtctagatcaccctatagaggctgcagagagagtcaagagtgac
ggatcagtgtctgttaagttctggttcgccacaggtggagcaggtttctgtatcagcaga
ggtctggcactgaaaatgagcccgtgggccagtttagggaatttcataagcacagctgag
aagatccgacttccggacgactgcaccattggctacatcatcgaggctctgctagaggtt
gccctaacacacacacacctcttccattctcacctggagaacctgcagaagctgccccct
gactctgtcctggaacaggtgactctcagctatggaggctttgagaacagaagaaatgtg
gtcagcattgctggaggtttttcactggctgaagaccccacacggtttaagacagtccac
tgccttctgtaccccgatactgactggtgtccaaagctcaaacttcgaaagaaaaactga
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