Xiphias gladius (swordfish): 120795244
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Entry
120795244 CDS
T07311
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120795244
Membrane trafficking [BR:
xgl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120795244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
120795244
NCBI-ProteinID:
XP_039992920
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All DBs
Position
LG10:complement(20481837..20504008)
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AA seq
1785 aa
AA seq
DB search
MKRSKHRGHKEDRNGDEPAVLETENLDRQGMFMGRGPDCDTISLASVTAVTTNLSNKRSK
PDIKMEPSSGRPVDYQVSVTVIEARQLVGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNE
YFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTIYSQPEHQFYHKWALL
SDPDDITAGCKGYVKCDIAVVAKGDTIKTPHKANESDEDDIESNLLIPEGVPAERQWARY
YLKIYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQIQFAGQKGKTSVQKSCYEPIWN
EQIFFTEMFPPLCKRIKIQIRDSDKVNDVAIGTHFLDLRKISNDGDKGFLPTLGPAWLNM
YGSTRTYTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPDVTSSTEVQVEGVPNI
SETATGKVEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEIDGVVKPNTKGKKGGG
NGDEEETELIHNSSEEEMDDDRDMTSVATTPPMKPVITDRNYFHLPYFERKPCIYIKSWW
QDQRRRLYNANIIDNIADKLEDGLNDVQEIIKTEKAYPERRLRGVLEELSQGCSQFLLLA
NKDQNQSGRTKLDRERLKLCLSEVETIGQQAKTMRSQVKKSTVRDKIKLAQNFLSKLRFL
ADEPQHSIPDVFIWMICNGKRIAYARVPSKDILYSSIDEERGKDCGKVKTIFLRIPGKKG
FGPAGWTVQSKIEIYLWLGLNRQRKDYLSGLPNGFEENKLSKGPGMPSSPPISLTYMMKQ
IFQLRVHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENVEL
FGEASELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMANENYGPPRFPPQLEYYQI
YRGNCTAGEMLAAFELLQIGPNGKADLPPIDGPTDIDRGPLLPVPLGIRPVLSKYRIEVL
FWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELL
HPPLNIRVVDCRAFGRYTLVGSNAVTSLRKFIYRATDKQANNWSTTEEIIVVNMEPEPAF
KKVDTVVKLDSCSDAVVKVEDDDKDAKGKKKKRRKGDETEDEELDESMLDWWSKYFASIE
TLTEALKAQEAALSDSEDKDDMDIADGGGTKRGKGKKEKKKPAVDPLEKKKPKLDELKVY
PKELESEFYNFEDWLHSFNLFRGKGGDDDDPNVTDEDRIVGKFKGSMCMYKVSDDIPRDM
SFDSNMGMFQNIPHNDPVNVLVRIYVIRATDLHPADINGKADPYISIKLGKTEIKDKENY
ISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDLENRFYSKHRATC
GISCNYAIHGYNVWRDPMKPTQILAKLCKDGKLDGPHYGPGGRVKVENRVFMAPTEIDDE
NGLKKQTDEHLALTVLKHWEEIPRVGCKLVPEHVETRPLLHPDKPGIEQGRIEMWVDMFP
KDMTAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQQED
KQDTDVHYHSITGEGNFNWRFIYPFDYLMAEEKIVISKKESMFAWDETEYKIPARLNLQV
WDADHFSADDFLGAIELDLNRFPRGAKTAKQCTIEMVTNEAEMPMVSIFKQKRIKGWWPF
VARNEDEEFELTGKVEAELQLLTGEEAEKSPAGEGRNEPEPLEKPNRPDTSLLWFLTPFK
AIKHLVCTQYKWLAIKIVTALLLLAMLAIFLYSMPGYMVKKMLGA
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgtggacacaaggaggacagaaacggagatgagccagctgtt
ctggagacagaaaacctggatcgccagggcatgttcatgggaagagggccagactgcgac
accatttcattggcctcagtcacagccgtcaccaccaatttatcaaataagagatcaaag
ccagacatcaagatggagcccagttctggaagaccagtagattaccaagtcagtgtgacg
gtgattgaggccagacagctggtgggactgaacatggatccaatggtgtgcgtggagatc
ggagaagataaaaagtacacctcaatgaaggaatcaaccaactgcccatactacaatgaa
tattttgtgttcgacttccatgtccctccagatgttatgtttgacaaaatcctgaagttg
tctgtaatccactctaaaaatctcctgcgcagtggaacactggttggaacttttaaactg
gatgttggcacaatctactctcagccagaacatcagttttaccacaaatgggctttgttg
tctgaccctgacgacatcacagcgggttgcaaaggctacgttaagtgtgatattgcagtt
gtggccaaaggagacactataaagactccccacaaggccaatgagtctgatgaagacgac
atagagagcaatctcttaatacctgagggggtacctgcagagcgacagtgggctcgctat
tacctgaagatctacagagcagagggactcccaagaatgaacaccagcatcatggccaat
gttaaaaaggccttcataggagaaaataaagacctggttgatccttatgttcaaatacag
tttgccggccagaaggggaaaacatcagttcaaaagagctgctacgagcccatctggaat
gagcaaatttttttcactgagatgtttccaccactgtgcaaacgcataaagatccagatc
cgtgactctgataaagtgaatgatgttgctataggaacacacttcctagacctacggaaa
atttccaatgatggggacaaaggcttccttcccacgttgggacctgcctggcttaacatg
tacggctccactcgtacctacaccctgatggacgagtaccaggagttaaacgaaggactc
ggagagggggtgtccttcagagcccgtctgctcatcagcctgggtgtggagatcctggac
ccgtcttcccccgatgttaccagctccacagaggtgcaggtggagggagtacccaacatc
tcagagaccgcaactggaaaggttgaggaatttttcctctttggatcattccttgaggct
acaatgattgacagaaagattggtgacaagcccataaactttgaggtcaccataggttac
tatggaaacgagattgatggagttgtcaagccaaatacaaaagggaagaagggtggaggc
aatggtgatgaagaagaaactgaactgattcacaattccagtgaggaagagatggacgat
gacagagacatgacttcagtggcaactacacctcccatgaaacctgtcatcactgatcga
aactacttccacctgccgtattttgagaggaagccatgtatctacatcaagagttggtgg
caggatcagagaaggaggctgtacaatgccaacattatagacaacattgcagataaactg
gaggatggactaaatgatgtgcaagaaatcattaagacagagaaggcctatcctgagcgc
cgacttaggggtgtccttgaggaactcagccaaggatgcagtcagtttcttttgctggca
aacaaggaccagaatcagtctggtagaaccaaacttgacagggagagactgaagctgtgc
ttgtcagaagtggagaccatcggccagcaagctaagaccatgaggtcacaggtgaagaag
agcacagtgcgggataaaatcaagctggcacagaatttcctctcaaagctgcgcttcctg
gctgatgaacctcaacacagcattcctgatgttttcatatggatgatatgtaatgggaag
cgcattgcttatgcacgtgtcccctccaaagacatcctttattccagtatagatgaggag
aggggaaaagactgcggcaaagtcaagacaatctttctcaggatccctggaaagaaagga
tttgggcctgctggctggaccgtgcagtcaaagatagagatttatctgtggctgggtttg
aataggcagcgcaaagactacctgagtggcctccccaacggatttgaggaaaataagttg
tccaaaggacccggcatgccgtcctcacctcccataagcctcacctacatgatgaaacaa
atcttccagctgagggtccacatgtaccaagctcgcagcctgtttgctgctgacagcaca
ggcctgtctgatccctttgcaagagtcttcttctcaacacaaagtcaagtcactgaggtg
ttggctgagactctctgccccacatgggaccagctgctggtctttgagaatgtggagttg
tttggagaggccagtgaactgagagatgaccctcctattattgtcattgaaatctatgat
caagacacggtgggcaaagctgacttcatgggcagaacgtttgctaaacctgtggtcaag
atggcaaatgagaactacggccccccacgcttccctccacagctggagtactatcagatc
taccgtgggaactgcaccgctggagaaatgctggcagccttcgaactgctgcagattggc
cccaatgggaaagctgacttgcctcccatagatggccctacagatatagaccgtggtcca
ctcctgcctgtaccccttgggatcagaccagtgctcagcaaatacaggattgaggttttg
ttctggggcttgagagacctgaagagggtgaatctggcccaggtggatcggcctcgtgtg
gacattgaatgtgctgggaagggagtacagtctgccctcatcccaaactacaagaaaaac
cccaacttcagcacccttgtcaagtggttcgaagtggatttgcctgagaatgagttgctt
cacccgccgctgaacatccgagtggtcgactgcagggcttttggccgctacactctggtt
ggctccaatgctgtcaccagcttgcggaagttcatctatagagcaacagacaagcaggcc
aacaactggtccacaacagaggaaattattgttgtcaacatggaacctgagcctgctttt
aagaaggtggacactgtggtcaaactagactcttgctctgatgctgttgtcaaagttgag
gatgatgataaggatgcaaaggggaaaaagaagaaaaggaggaagggtgatgagactgaa
gatgaggaacttgacgagagcatgttggactggtggtccaaatattttgcctccattgag
actttgacagaggcactcaaggctcaagaagcagctctctcagattcagaggacaaagac
gacatggacattgcagatggaggaggcacgaagagaggaaaaggaaagaaggaaaagaag
aagccagctgtcgacccattagagaagaaaaagccgaagttggatgagctgaaggtgtat
cctaaggagcttgagagtgaattctacaacttcgaggactggctccacagttttaacctg
ttcaggggaaagggtggcgatgatgacgacccaaacgtgacggacgaggacaggattgtt
gggaaattcaaaggctcaatgtgcatgtacaaagtgtcagatgatatacccagagacatg
agcttcgactccaacatgggaatgtttcagaacatccctcacaatgatccagttaatgtc
cttgtccgcatctatgtcatcagggcgactgacctgcatccagctgacattaatgggaaa
gctgacccatacatttcaatcaaactgggaaagacagagatcaaagacaaagagaactac
atctctaaacagctgaaccctttgtttggcaaatcctttgacgtggaggccacattccca
atggattctacactcacggtgtcaatttatgactgggacctggtgggaaccgatgatctg
attggagaaacgaaacttgacctcgagaaccgtttctacagcaaacacagagccacgtgt
ggtatctcgtgtaactatgccatccatggttacaatgtttggagggacccaatgaaaccc
acacagatcctggctaagctgtgcaaggatggcaaactggatgggcctcactatggccct
ggaggaagagtgaaggtggagaaccgtgtcttcatggcaccgactgagatcgatgatgaa
aatggtttgaagaagcagacagatgaacacctggctctgaccgtgttgaagcactgggag
gaaatcccacgggttgggtgcaaacttgtcccagaacacgtggaaacaagaccactgctc
caccctgacaaaccaggaattgaacaaggaagaattgagatgtgggtggatatgttccct
aaggacatgactgctccaggccctgcacttgacatttcaccacggaaaccaaagaagttt
gaactgagggtgatcatctggaacacagatgaagttgttctagaggatgatgacatcttt
actggcgagaaatcgagtgatatatttgtgcgaggttggttgaaagggcagcaggaggac
aagcaagacactgacgtccactaccactccatcactggggagggcaacttcaactggcgc
ttcatctatcccttcgactacctcatggctgaagagaagattgtcatctcaaagaaagag
tccatgtttgcctgggatgagaccgagtacaagattccagctcgtcttaatctgcaagtg
tgggacgctgaccatttctctgcagatgacttcttaggtgcaattgagctggacctgaac
cgtttcccacgtggtgcaaagactgccaagcagtgcaccattgagatggtgacaaatgaa
gcagagatgcccatggtctccatcttcaaacagaagaggatcaaaggctggtggccattt
gtggccagaaatgaagacgaagagtttgaactgacgggaaaagtggaagcagagctgcag
cttctgacaggagaggaagccgagaaaagcccagctggtgaaggacgcaatgaaccagag
ccgctagaaaaacccaaccgtccagacaccagccttctgtggttcctcactcccttcaaa
gccataaaacacttggtctgcacccagtacaagtggctggccatcaagattgtcactgct
ctcctgctgctggccatgctagctattttcctctacagcatgcctggttacatggtcaag
aaaatgctgggagcttga
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integrated database retrieval system
