Xiphias gladius (swordfish): 120795957 Help Entry 120795957         CDS       T07311                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism xgl  Xiphias gladius (swordfish) Pathway xgl04115   p53 signaling pathway xgl04145   Phagosome xgl04148   Efferocytosis xgl04350   TGF-beta signaling pathway xgl04510   Focal adhesion xgl04512   ECM-receptor interaction xgl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:xgl00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     120795957   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120795957  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     120795957    04148 Efferocytosis     120795957   09143 Cell growth and death    04115 p53 signaling pathway     120795957   09144 Cellular community - eukaryotes    04510 Focal adhesion     120795957   09142 Cell motility    04820 Cytoskeleton in muscle cells     120795957  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:xgl04131]     120795957   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:xgl00536]     120795957 Membrane trafficking [BR:xgl04131]  Endocytosis   Phagocytosis    Opsonins     120795957 Glycosaminoglycan binding proteins [BR:xgl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120795957 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS EGF_CA TSP1_CFP_C cEGF TSP1_CCN Motif Other DBs NCBI-GeneID:  120795957 NCBI-ProteinID:  XP_039994209 LinkDB All DBs Position LG10:11528220..11537306 Genome browser AA seq 1172 aa AA seqDB search MMLCGIFLLLMLWSCEGARLAESREDNSVYDLFDLAQVNKRHHGVSLVKGADPYSPAYRV LNADLIPSIPDSSFRDLLDSIQAERGFLLLVNLKQFKKTRGSILTIEKNDGSGPVFEIIS NGKANTLDVVYSTMNQQQVVSIEDADLATGHWKNITLFVEDDRAQLFVGCEEINISEMDV PIHKVLSQEVADIARLRIGKGAVKDRFIGVLQNVRFVFGTTLNAILRNKGCQREATLTDV MTLDNPVNGSSPAIRNDYTGHKAKDLQSVCGFSCDDIASMFKELKGLGVVVKQLSNELRK VSEDSTLLKNQMNIHSGVCFHNGMVYKDKDEWTVDGCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCEPSTHVIEDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGEG RQTEMCQKSPCPVDGGWGPWSPWDTCTVTCGGGVHTRKRLCSDPVPKYGGKDCVGDATMS RVCNKQGCPIDGCLSNPCFPGTKCTSFPDGSFRCGKCPLGYRGNGLICKDIDECKEVPDA CHTHNGVHRCENTKPGYNCLPCPARFSGPQPFGRGVEQATVKKQVCTPRNPCRDGSHDCN KNANCIYLGIFSESMFRCECKPGYAGNGRICGEDSDLDGWPNMDLLCVKNATYHCKKDNC PNLPNSGQEDHDKDGLGDECDHDDDNDDIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV FEANTDQADTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQVDSDSDLVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLVFNVDQLDSDGDGRGDACKDDFDQDSVPDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKNGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatcttcttgctgttgatgctttggagttgcgaaggcgcaagactg gcagagagtcgagaggataacagtgtgtatgacttatttgatctggcccaagtaaacaag agacaccatggagtgagtttggttaaaggcgcagatccctacagccctgcatacagagtc ctgaatgcagacctgatcccctccatccccgacagctcctttcgggacctccttgattcc atccaggctgagaggggcttcctcctcctggtcaacctgaagcagtttaagaaaaccaga ggcagcattttgaccatcgagaagaatgatgggtctgggccagttttcgagatcatttcc aatggcaaggcgaacactctggatgtggtctactccacaatgaaccagcagcaggtcgtg tccatcgaggatgcggatttggccactggacactggaagaacatcacgctgttcgttgag gatgaccgggcgcagcttttcgtcggctgcgaggagattaatatatcagagatggatgtt cccatccataaagtgctgtcccaggaggtggcagacatcgccaggctcaggattggaaag ggagctgtgaaggacagatttataggagtccttcagaatgtgcgctttgtctttgggacc actcttaatgccatactaagaaataagggatgccagagggaagctaccttaactgatgtc atgaccctggacaacccagtcaacgggtccagcccagccattaggaatgattacactggc cacaaagccaaagatctccagtctgtctgcggcttctcttgtgatgacattgccagcatg tttaaggagctcaagggactcggtgtggttgttaaacagctgtcaaacgagctccgaaaa gtgtctgaggacagcacactgctgaaaaatcaaatgaacatccacagtggagtctgcttc cacaatggcatggtgtacaaagacaaagatgaatggaccgtggacggctgcaccgagtgc acctgccagaactctgctactgtgtgtcgtaaaatctcctgccctctgatcccatgtgct aatgccaccgtgcccgacggagagtgctgccctcgctgtgaaccatcgactcatgttatc gaggatggatggtctccctggtctgaatggacccattgttcagtgacttgcggccgtggc atccagcagcgtggacgctcctgcgaccgcatcaacagcaactgtgagggcacctctgtc cagacccgtgactgctacccccaggaatgtgacaaacgcttcaaacaggatggtggttgg agtcactggtctccatggtcttcatgctctgtgacctgtggtgaaggggtcatcacccgg atccgcctctgcaactcccccacaccccagatgggtggcagggactgccagggagaagga cgtcaaactgaaatgtgtcagaagtcgccttgccctgtcgatggaggttggggaccttgg tcaccatgggacacctgcactgttacctgtggtggaggagtccacacccgcaaacgcctc tgctctgaccctgtcccaaaatatggtggaaaggattgtgttggtgatgccactatgtct cgagtgtgcaacaaacagggctgtcctattgatggttgtctgtccaacccatgcttccct ggcacaaagtgcaccagcttccctgatggctctttcaggtgtggcaagtgtccacttggc taccgtgggaatggcctcatctgcaaggacattgatgagtgtaaagaggtccctgatgcc tgccacacacataacggtgtccatcgctgtgagaacactaagcctggttacaactgtctg ccttgccctgcacgtttctccggtcctcagcccttcggaaggggagtggaacaggcaact gttaaaaaacaggtgtgcacacctcgtaacccttgtcgggatggaagccatgactgcaat aaaaatgcaaactgcatctacttgggcatcttctctgagtccatgttccgttgcgagtgc aagccaggttatgctgggaatggccgtatttgtggagaggacagtgacctggatggctgg ccaaacatggacttgctgtgtgtgaagaatgctacctaccactgcaagaaggataactgc cccaaccttcccaactctggtcaggaagatcatgacaaagatggcctgggtgatgaatgt gaccatgatgatgacaatgatgacatccctgatgatagggataactgcccaagagtgtac aaccctgcccagtacgatgcagacagggatgatgttggggaccgctgtgacaactgtgtg ttcgaggctaacactgaccaagcagacactgacaacaatggagagggtgatgcctgtgct gttgacattgatggtgatggcattctgaatgagaacgacaattgtccatatgtttacaat gtggaccagagagatactgatagagatggtgtgggagaccattgtgacaactgccctctg gagcacaaccctgatcaggtcgactctgactcagatcttgtaggagacaagtgtgacaac aaccaggacatcgacgaagacggtcaccagaacaatttggacaactgcccctacatcccc aacgccaaccaagcagaccatgacaaggatggcaagggtgatgcctgcgaccatgacgat gacaatgacggcattcccgatgacaaggacaactgtcgactggtctttaacgttgaccaa ctggactctgatggtgatggccgtggtgatgcgtgcaaagacgatttcgaccaagacagt gttccagacatctatgacgtgtgcccagagaactttgccatcagtgaaacagacttccgc agattccagatggttcctctggacccgaagggtacctcccagattgaccccaactgggtg gtccggcatcagggcaaggagttggtgcagactgtcaactgcgatcctggcattgctgtt ggtttcgatgagttcagcgcagtggatttcagtggaacattcttcatcaacacggacaga gatgacgattacgctgggttcgtgtttggctaccagtccagctcacgcttctacacagtc atgtggaaacagatcacacagacctactggtctcacacacccacaagagctcaaggctac tctggcctgtcaatcaaagtcgttaactccaccactggccctggtgagcatctgaggaat gccctgtggcacaccggagacaccccaggacaggtgcgcactctgtggcatgaccccaag aacattggctggaaggacttcactgcctacagatggcacctgacccacagacccaagaat ggacttatcagagtggtcatgtatgaaggcaagagaatcatggctgattctggaaacatc tacgacaagacatacgctggtgggcgactaggcttgtacgtcttctctcaggagatggtt tacttctcagacctcaaatacgaatgcagagatacataa

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