KEGG   Xiphias gladius (swordfish): 120796889
Entry
120796889         CDS       T07311                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120796889 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xgl03041]
    120796889 (smndc1)
Spliceosome [BR:xgl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120796889 (smndc1)
 Complex B
    120796889 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    120796889 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 PUA_4
Other DBs
NCBI-GeneID: 120796889
NCBI-ProteinID: XP_039995985
LinkDB
Position
LG11:11406854..11422833
AA seq 238 aa
MSDDLVKQLSSYKAQLQQVEVALSTDPENEDLLKLQKDLQEVIDLTKDLLTSQPTDGASS
AYGSDTVPLKHGWKVGDRCMAVWSQDGQVYEAEIEEIDRENGTAAVTFTGYGNAEVIPLQ
NLKAAEEGKRSDEDGSIKPKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggacgacttggtgaaacagttaagcagctacaaagcccagctgcagcaagtggaa
gtcgccttatctaccgacccagaaaatgaagacctcctaaagctccagaaagacttacag
gaagtaatcgatttgacaaaagacctcctgacctcacagcccactgatggtgcttccagt
gcttatggctcagacacagtcccactgaagcatggctggaaagtgggggacaggtgtatg
gctgtgtggagtcaggatggacaggtgtatgaggctgagattgaggagatagaccgagag
aacggcacagcagccgttaccttcactggatacgggaatgctgaagtgatccctctgcaa
aacctcaaagcagcagaggaagggaaacgttctgatgaggatgggagtataaagcccaaa
tcaaggaaagagcaaatagcagagcagagagagtataagaagaagaaagcccagaaaaag
gtacagaggatgaaggagttggagcaagagagagaggaacaaaagtcaaagtggcaacag
ttcaacaacaaagcctactcaaagaacaagaaaggacaggtaaagaggagcatatttgca
tctccagaaagtgtaaatggaaaggtgggcgtgggaacatgtggtattgcagacaagcct
atgacccagtaccatgacacatcaaaatacaatgtcagacacctaatgccccaatga

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