KEGG   Xiphias gladius (swordfish): 120797022
Entry
120797022         CDS       T07311                                 
Name
(RefSeq) mamu class II histocompatibility antigen, DR alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl04145  Phagosome
xgl04514  Cell adhesion molecules
xgl04672  Intestinal immune network for IgA production
xgl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120797022
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120797022
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120797022
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120797022
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xgl04147]
    120797022
Exosome [BR:xgl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120797022
  Exosomal proteins of epithelial cells
   120797022
  Exosomal proteins of breast milk
   120797022
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_2 C2-set_3 I-set Ig_2 DUF779
Other DBs
NCBI-GeneID: 120797022
NCBI-ProteinID: XP_039996167
LinkDB
Position
LG12:19580863..19584133
AA seq 244 aa
MKMMMMMMKVSELVLVLSCVLCVSADSLHVDLAITGCSDTDGENMYALDGEEMWYADFIN
KRGVEPQPGFIDQTSYEEGAYERAVANQQICKSNLKNGRIGMKDLALNIDPPSSPMIYTR
DEVELGEKNILICYVTGFYPAPVTVYWTKNGEEVTEGTSINIPYPNKDGSFNQISRLEFV
PQLGDMYSCSVKHPALNQPLTRFWDVEVKQPSIGPAVFCGLGLTVGLLGVAAGTFFLIKG
NECS
NT seq 735 nt   +upstreamnt  +downstreamnt
atgaagatgatgatgatgatgatgaaggtgtcagagctggtcctcgtcctctcctgtgtc
ctctgtgtctccgctgacagtctgcatgtggacctcgctatcactggctgttcagacact
gatggagagaacatgtacgcactggacggtgaagagatgtggtacgcagacttcatcaac
aagagaggagtcgagcctcagcccggttttatagatcaaaccagctatgaggaaggagct
tatgaacgagctgtagctaatcaacagatctgcaaatcaaacctgaagaacggccgtatc
ggtatgaaggacctcgcactgaatatagatcctccttccagtccgatgatctacaccaga
gacgaagtggagctcggagagaagaacatcctgatctgttatgtgactggtttctaccct
gctcctgtcacagtctactggaccaagaacggagaggaagtgactgaaggaacgagtatc
aacattccctatcctaacaaagatggttccttcaaccagatttccagactggagttcgtc
ccacagctgggagacatgtacagctgttcagtgaaacatccagctctgaaccaaccactg
accagattctgggatgtggaggtgaagcagcccagcattggacctgcggtattttgtgga
ctgggtctgacggtcggtctgctcggcgtggctgctggcaccttcttcctcatcaaagga
aacgagtgcagctga

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