Xiphias gladius (swordfish): 120797240
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Entry
120797240 CDS
T07311
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00310
Lysine degradation
xgl00514
Other types of O-glycan biosynthesis
xgl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120797240 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120797240 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xgl01003
]
120797240 (plod3)
Enzymes [BR:
xgl01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
120797240 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120797240 (plod3)
2.4.1.66 procollagen glucosyltransferase
120797240 (plod3)
Glycosyltransferases [BR:
xgl01003
]
O-Glycan biosynthesis
O-linked Gal type
120797240 (plod3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
DUF6492
Motif
Other DBs
NCBI-GeneID:
120797240
NCBI-ProteinID:
XP_039996666
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Position
LG12:19182595..19203896
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AA seq
733 aa
AA seq
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MSSRSLLCLLALALFQCSVSAEQRRLSPENLLVITAATEETDGFNRFMRTVTEFNYTVKV
LGLGEDWKGGDVARTVGGGQKVRWLKRELLKHSDKKDMVIMFVDSYDVIFASGPEELLSK
FSRLGHRVVFSAEGFCWPDQRLAPKYPVVHSGKRYLNSGGFIGFAPDLSAIVQQWKYKDN
DDDQLFYTRIYLDKTQRTKFNMTLDHRSRIFQNLNGAVDEVVLKFERAKVRARNVAYDTL
PVVIHGNGPTKLQLNYLGNYVPTAWTYENGCGICDDDLLFFSDVPDEEMPLVYVAVFIEH
ATPFMEEFLDRLTTLNYPTARIRLFVHNNVVYHERHIQRFWERHRTLFPDALLVGPEENL
QEDKARTMAVEACKKNPECDYYFSIDSDVALTNPDTLRILIEENKSVIAPMLSRHGKLWS
NFWGALSPEGYYSRSEDYIEIVQGKRIGLWNVPYITQAYLIKGSVLRSKLSQVSLYLDEG
MDPDMVFCRSIRDQGVFMFVSNRDEFGRLVASTNFNTSRLHPDMWQIFDNPVDWKEKYIH
ENYSRIFEDQKIFVEQPCPDVYWFPAFSDKMCDHLVETMEDCGQWSGGSHKDERLAGGYE
NVPTVDIHMNQIGFEKEWLKFLKEYIVPVTEKLYPGYYPKAQAIMNFVVRYRPDEQPSLR
PHHDSSTFTINIALNRKGIDYEGGGCRFLRYDCKVESPRKGWSFMHPGRLTHYHEGLPTT
RGTRYIMVSFVDP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccgtagtcttctctgcctgctggctctcgctctcttccagtgctctgtgtcg
gccgaacagcggaggctctctccagaaaatctgctggtaatcaccgcggcaacagaggag
acagatggcttcaaccgcttcatgaggacagtcacagagttcaactacactgtgaaggtg
ctcggcctgggcgaggactggaaggggggtgatgtggctcggacagtgggtggaggtcaa
aaggtgagatggttgaagagggagctgctcaaacactctgacaagaaggacatggtcatc
atgttcgtggacagttatgatgtgatcttcgcgtcgggtccagaggagctgctgtccaag
ttttctcgactcggtcaccgagtggttttctcagctgagggattctgctggcccgaccag
agactggcccccaaatacccagtggtgcattctgggaaacgctacctcaactcaggaggt
ttcatcggcttcgctccagatctcagtgcgatcgtccagcagtggaagtacaaagacaat
gacgacgaccagcttttctacaccaggatctacctggacaagacacagaggaccaagttc
aacatgaccctggatcatcgctcccgaatcttccaaaacctgaacggagctgttgatgaa
gtcgtcttgaagtttgagagggcaaaggtcagagcgaggaacgtcgcctacgacacactg
cctgttgttatccatggcaacggaccaaccaagctgcaattgaattacctgggtaactac
gtccccacagcgtggacctatgagaacggatgtgggatctgtgacgacgacctgctcttc
ttcagcgacgtacctgatgaggagatgcctctggtttacgttgcagtgtttatcgaacat
gcaactcccttcatggaggagttcctggaccgactgacgacactcaactaccccacagcg
aggatccgcctcttcgttcacaacaacgtcgtgtaccacgaacgtcacatccagaggttc
tgggagcgtcacaggactttgtttcctgatgccctgctggtcggaccggaggagaacctg
caggaggacaaggccagaaccatggctgtcgaggcgtgtaagaagaatccagagtgtgat
tactacttcagcatcgactccgacgtggccttgacgaaccccgacacactgaggatacta
atcgaggaaaacaagtctgttatagcccccatgttgtccagacacgggaagctgtggagt
aacttctggggcgctctgagtcctgaaggatactactccagatctgaagactacatcgag
atcgtccagggaaagaggatcggtctgtggaatgtgccgtacatcactcaggcctacctg
atcaaaggaagcgtcctgcgatccaaactgtcccaggtgagcctgtacttggacgagggg
atggaccctgacatggtgttctgcaggagcatcagagaccagggagtcttcatgttcgta
tcaaaccgcgacgagttcggtcgtctggtggcgtcgaccaacttcaacacgtccaggctg
cacccggacatgtggcagatcttcgacaaccctgtggactggaaggagaagtacatccat
gagaactactccaggatctttgaagatcagaagatctttgtggagcagccctgtccagat
gtttactggtttccagctttctcagataagatgtgtgatcacctggtagagaccatggag
gactgtggccagtggtctggaggttcacacaaggatgagcgtctggctggcggttatgaa
aacgtcccgactgtggatatccacatgaaccagatcggctttgagaaggagtggctcaaa
ttcctcaaagagtacatcgtccccgtcactgaaaaactctatcctggatattaccccaag
gcccaggccattatgaactttgtggtgcgttaccgtcctgacgagcagccgtctctgagg
ccgcatcatgactcctccaccttcaccatcaacatcgccctgaacaggaagggcatcgac
tacgagggtggaggctgcaggttcctgcgttacgactgcaaggtggagtctcccaggaag
gggtggtccttcatgcacccgggccggctgacccactaccacgagggcctgcccaccacc
agagggaccagatacattatggtgtcctttgtcgacccctga
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