KEGG   Xiphias gladius (swordfish): 120797385
Entry
120797385         CDS       T07311                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl04145  Phagosome
xgl04514  Cell adhesion molecules
xgl04672  Intestinal immune network for IgA production
xgl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120797385
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120797385
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120797385
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120797385
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xgl04147]
    120797385
Exosome [BR:xgl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120797385
  Exosomal proteins of epithelial cells
   120797385
  Exosomal proteins of breast milk
   120797385
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_3 C2-set_2 I-set ig DUF779
Other DBs
NCBI-GeneID: 120797385
NCBI-ProteinID: XP_039996941
LinkDB
Position
LG12:complement(19714023..19718232)
AA seq 241 aa
MKMMMKVSELVLVLSCVLCVSADSLHVDLYIGGCSDTDGENMYTLEGEEMWYADFINKRG
VEPQPGFIDHMSYVEGTYERAVANQQVCKSNLKVDQHNFKDVPLEFDPPSRPMIYTRDTV
ELGENNTLICYVTGFYPAPVTVYWTKNRQEVTEGTSINIPYPNKDGSFNQISRLEFVPQL
GDMYSCSVKHPALNQPLTRFWDVEVKQPSIGPAVFCGLGLTVGLLGVAAGTFFLIKGNEC
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaagatgatgatgaaggtgtcagagctggtcctcgtcctctcctgtgtcctctgtgtc
tccgctgacagtctgcatgtggacctttatatcggtggctgttcagacactgatggagag
aacatgtacacactggaaggtgaagagatgtggtacgcagacttcatcaacaagagagga
gtcgagcctcagcccggttttatagatcatatgagctatgtggaaggaacttatgaacga
gctgtagctaatcaacaggtctgcaaatcaaacctgaaagtagatcagcataacttcaag
gacgtcccactagagttcgatcctccttcccgtccgatgatctacaccagagatactgtg
gagctcggagagaacaacaccctgatctgttatgtgactggtttctaccctgctcctgtc
acagtctactggaccaagaacagacaggaagtgactgaaggaacgagtatcaacattccc
tatcctaacaaagatggttccttcaaccagatttccagactggagttcgtcccacagctg
ggagacatgtacagctgttcagtgaaacatccagctctgaaccaaccactgaccagattc
tgggatgtggaggtgaagcagcccagcattggacctgcggtattttgtggactgggtctg
acggtcggtctgctcggcgtggctgctggcaccttcttcctcatcaaaggaaacgagtgc
agctga

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