Xiphias gladius (swordfish): 120798621
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Entry
120798621 CDS
T07311
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120798621 (tcf3a)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
120798621 (tcf3a)
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GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
120798621
NCBI-ProteinID:
XP_039998975
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Position
LG14:complement(12371980..12398709)
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AA seq
634 aa
AA seq
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MAAVETDKELSDLLDFSAMFEPPVSNGKNRPTTLASSQFGGSGIDERSGSSPWGPGEQNS
PSFNQGRGYGEEGLYSEQEGMASAPIFGSGIVGKAERGPYSSFAAQPGFLPSEIPMPSPD
PLSPSGLKPNSQFYSSYEGSNPRRRPSQDPIEPQPKKIRKVPPGLPSSVYASASGEDFNR
DSTGYPASKAGNVYPPPFYMQEGLHPPSDPWGSAGSMVQPGFSSMLGNSPHLSQHGPFTA
INPQDRLKRQPLPLSPQNYPLHGSEVNGAHPAGFHSSSSSFGVASHTPPIAGTDTIIANR
GAIPGSSGDEIGKALASIYPSDQNSNAFPPSPSTPSGSPQAVSGSASQWTRSSGQATPSP
NFEGGIQSMQSKLEDRLDEAINVLQRHASGQGGPGLAEMHSLLASGLGLPPGFNSAALGL
ASRLPGLLSSHRDDSVGLPSSGGLLHSHHGPTSVQPGCQPERFTGLPGSLNRSSGADIKQ
EEKEDDENCSITDKSEDERKDMKARLGTSLDDEDDDEDLPVEIKAEREKVRRLANNARER
IRVRDINEAFKELGRMCQLHLSYEKPQTKLIILQQAVNVILNLEQQVRERNLNPKAACLK
RREEEKVSSVDPQMQLGGGTPGLGGDGHNPVSHM
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtggaaacagacaaggaactcagcgacttgctggattttagcgcgatgttt
gagcctccagtttcaaatggcaagaaccggccgactactctcgccagcagtcagtttgga
ggttcaggtatagatgagaggagtgggtccagtccctggggaccaggagaacagaacagt
ccatcgttcaaccagggaaggggttatggagaagaaggcctttacagtgaacaagaaggt
atggcctctgcccccatatttggatcagggattgttgggaaggctgagcgaggaccatac
tcgtcatttgcagcacagcctggctttttgcccagtgagatacccatgcccagtcctgat
cccctctccccatctggcctgaagcccaactcccagttttattcctcctatgaggggagc
aaccctcgcaggagaccctcacaggaccccattgaaccacagccaaaaaagatcaggaag
gtgccccccggcctaccctcctcggtttatgcatcagcctcaggagaggattttaacagg
gacagcactggctacccagcctccaaggcaggaaacgtctacccaccaccattctacatg
caagaaggcctccacccgccctccgatccatggggctctgccgggtcgatggttcagcct
ggtttttcttccatgctgggcaactccccccatctgagccagcatggtcccttcactgcc
atcaacccccaagacagactgaaacggcagccgctgcccctctctccacaaaactacccc
ctgcatggcagtgaggtgaacggggctcatcccgctggctttcactccagctccagcagc
tttggagtcgccagccacacaccccccatcgctggaactgacaccattattgccaatcgg
ggagcaatacctggaagttcaggtgatgagattggaaaggccctggcatctatctatcct
tcagaccaaaacagtaacgccttccctccgtccccgtctactccctctggctctcctcag
gctgtatcaggctctgcatcccagtggactcggtcctctggccaggccacaccttcacct
aattttgaggggggaattcagtccatgcagagtaaattggaggaccgtctggatgaagcc
atcaatgttcttcagcgtcacgccagcgggcaaggaggtccagggctggctgaaatgcac
agtctgctcgcgtctggcttaggcctacctccaggcttcaacagtgcagcacttggactg
gccagtcgcctgcctggactgctgtccagtcaccgtgatgactcagttggtctgccctct
agtggaggacttctgcatagtcaccatggccccacatctgtccagccaggctgtcagcct
gaacgttttaccggcctgcctggcagcctaaatcgttccagtggtgcagatatcaaacaa
gaggagaaggaggatgatgagaactgctccatcacagacaagtcagaggatgagagaaaa
gacatgaaggcccgccttggaacaagtctggatgatgaggatgacgatgaagatctacca
gtggagattaaggctgagcgggagaaagtgcggaggttggcaaacaacgcccgcgaacgg
atacgtgtgcgggacatcaacgaggcttttaaggagctgggccgcatgtgtcagctccat
ctgagctatgagaaaccacagaccaaattgatcatactgcaacaggccgttaacgttata
ctcaacctggagcagcaagttcgagagcgtaatttgaacccaaaggctgcctgcctcaaa
aggagagaggaagagaaagtgtcgagtgtggacccccagatgcagcttggtgggggtacc
cctggtttaggaggagatggacacaaccctgttagccatatgtaa
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