Xiphias gladius (swordfish): 120798672
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Entry
120798672 CDS
T07311
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04217
Necroptosis
xgl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120798672
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120798672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120798672
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
120798672
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120798672
NCBI-ProteinID:
XP_039999081
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Position
LG14:16631858..16638165
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AA seq
436 aa
AA seq
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MALSSGGWAPPAPVPAPSQQAACGGPAPTACCSTVLMSVRVSVCHSGIRPLCLPGAGSET
LRLQLSMDPSRAGEFRLALRDTSGNRSVFIAEFDLRSVQYEVKSPRCHEMRLAAPPQDCI
RFNFRCDREAEEWATVVMSSLREAHRVANINTCESDGRQDHTAAAAEQWSSASLPLTEEL
CLELARAIEAGDAQAASQHASALARQKAVLTIQPSEKNYADAEISLSVVVEDVSSSCCVT
VKVFPYMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQKDGDTAYLYLIS
ARQARITRHLFQQDLESALLAPPLPPGNGPASQDWRGYSTLPSKLPHSNQGNTGGGSDRP
SDIKDVLDIENLQLNDPTNKASKTQQTEWACPSCTFINKPSRPGCEICATARPDTHIQQE
KGRREDRGESGLSSSS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcactcagctcgggcggctgggctcctccagcccccgtccctgcgccgtcccagcag
gctgcatgcggcgggcctgcgccgacggcttgctgcagtactgttttgatgtcagtccgg
gtttcggtctgccactccgggattcggcccctgtgcctccccggagcaggcagcgagact
cttcgcctacagctcagcatggacccgagccgggccggagagttcagactggcgctgcga
gacacgagcggaaaccgcagtgtgttcattgcagagtttgacctgcgctcggtgcagtat
gaggtcaagtcccctcgctgccatgagatgcgtcttgctgctccgccccaagactgcatc
cgcttcaatttccgctgcgaccgagaggccgaggagtgggccacggtggtgatgtcgtca
ctgagagaggcacacagggttgcaaatatcaacacgtgtgaatcagacggcagacaggac
cacacagcggcagccgcggagcagtggagctcggcctcgctgccactcaccgaggagctg
tgcttggagctcgccagggcgattgaggcgggcgacgcccaggccgcctcccagcacgca
tccgccctggcccggcagaaggcggtgctgacgattcaaccgtctgagaagaactacgcc
gacgccgagattagtttatccgtggtggtggaggatgtctcgtcttcctgttgtgtcacg
gtgaaggttttcccctacatgaccgtggctgctctcaagcaacaggtgttcctcgagtac
ggcttccacccccgcgtgcagcgctgggtgatcggtcagtgtttgtgcaccgagccgagg
tcactggcgtcctacggcgtgcagaaggacggcgacacggcgtacctctacctgatctcc
gcccggcaagcccgcatcacccgccacctgttccagcaggacctggagagcgccctcctc
gccccgcccctcccgccgggcaacggacccgcctcccaagattggaggggctacagcacc
ctgccctcgaaactaccccacagcaaccaggggaacacaggtggaggaagcgatagaccc
agtgatatcaaagatgttctcgacatagagaatctgcaactgaatgatcccaccaacaaa
gccagtaaaacgcagcagacagagtgggcttgtccttcatgcactttcatcaacaagcca
tctcgtccgggctgcgaaatttgcgctacggccagacccgacacacacatccagcaggag
aaaggaaggcgagaggaccggggagagtccggtttaagcagcagcagctga
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