KEGG   Xiphias gladius (swordfish): 120799714
Entry
120799714         CDS       T07311                                 
Symbol
actb1
Name
(RefSeq) actin, cytoplasmic 1 isoform X1
  KO
K05692  actin beta/gamma 1
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03082  ATP-dependent chromatin remodeling
xgl04145  Phagosome
xgl04210  Apoptosis
xgl04510  Focal adhesion
xgl04520  Adherens junction
xgl04530  Tight junction
xgl04810  Regulation of actin cytoskeleton
xgl04814  Motor proteins
xgl04820  Cytoskeleton in muscle cells
xgl05100  Bacterial invasion of epithelial cells
xgl05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120799714 (actb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120799714 (actb1)
  09143 Cell growth and death
   04210 Apoptosis
    120799714 (actb1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120799714 (actb1)
   04520 Adherens junction
    120799714 (actb1)
   04530 Tight junction
    120799714 (actb1)
  09142 Cell motility
   04814 Motor proteins
    120799714 (actb1)
   04820 Cytoskeleton in muscle cells
    120799714 (actb1)
   04810 Regulation of actin cytoskeleton
    120799714 (actb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120799714 (actb1)
   05100 Bacterial invasion of epithelial cells
    120799714 (actb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xgl03021]
    120799714 (actb1)
   03019 Messenger RNA biogenesis [BR:xgl03019]
    120799714 (actb1)
   03036 Chromosome and associated proteins [BR:xgl03036]
    120799714 (actb1)
   03029 Mitochondrial biogenesis [BR:xgl03029]
    120799714 (actb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xgl04812]
    120799714 (actb1)
   04147 Exosome [BR:xgl04147]
    120799714 (actb1)
Transcription machinery [BR:xgl03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     120799714 (actb1)
Messenger RNA biogenesis [BR:xgl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     120799714 (actb1)
Chromosome and associated proteins [BR:xgl03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     120799714 (actb1)
    NuA4 complex
     120799714 (actb1)
  Chromatin remodeling factors
   BAF complex
    120799714 (actb1)
   PBAF complex
    120799714 (actb1)
   GBAF(ncBAF) complex
    120799714 (actb1)
   SWR1 complex
    120799714 (actb1)
Mitochondrial biogenesis [BR:xgl03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    120799714 (actb1)
Cytoskeleton proteins [BR:xgl04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     120799714 (actb1)
Exosome [BR:xgl04147]
 Exosomal proteins
  Proteins found in most exosomes
   120799714 (actb1)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 120799714
NCBI-ProteinID: XP_040000949
LinkDB
Position
LG15:8689960..8694101
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPESLFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagacgaaattgccgccctcgttgttgacaacggatctggtatgtgcaaagctggc
tttgcaggagatgatgctccacgtgctgtgttcccttccattgttggacgtcccaggcat
cagggtgtgatggttggtatgggccagaaagacagctatgttggtgacgaggcacagagc
aaaaggggaatcctgaccctgaagtaccccattgagcacggtattgtcaccaactgggat
gacatggagaagatctggcatcacaccttctacaatgagctgagggttgcccctgaggag
cacccagtcctgctcacagaggcccccctgaaccccaaggccaacagggaaaagatgacc
cagatcatgtttgagaccttcaacacccctgccatgtatgtggccatccaggctgtgctg
tccctgtacgcctccggtcgtaccactggtattgtcatggactctggtgatggcgtgacc
cacacagtgcccatctatgagggctacgctctgccccacgccatcctcaggttggacctg
gctggcagggacctcacggactacctcatgaagatcctgactgagaggggctacagcttc
accaccacagctgagcgtgagattgtgcgtgatattaaggagaagctgtgttacgttgca
ctggacttcgagcaggaaatgggaactgctgcctcctcttcatccctggagaagagctat
gagctgcctgacggacaggtcatcacaatcggaaatgagaggttccgttgccctgagtcc
ctcttccagccctctttccttggtatggagtcttgtggtatccatgaaactaccttcaac
agcatcatgaagtgtgatgtggacatccgtaaggacctgtacgccaacactgtgctgtct
ggaggtaccaccatgtaccctggcattgctgaccgtatgcagaaggaaatcactgccctg
gcacccaccaccatgaagatcaagatcattgctcccccagagaggaagtactctgtatgg
attggaggctccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgagtccggccccagcatcgtccacaggaagtgcttctaa

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