Xiphias gladius (swordfish): 120799791
Help
Entry
120799791 CDS
T07311
Symbol
traf5
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04217
Necroptosis
xgl04621
NOD-like receptor signaling pathway
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120799791 (traf5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120799791 (traf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120799791 (traf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120799791 (traf5)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
120799791 (traf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-TRAF_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
Spt20_SEP
DASH_Duo1
Sina_ZnF
zf_C2H2_13
Motif
Other DBs
NCBI-GeneID:
120799791
NCBI-ProteinID:
XP_040001094
LinkDB
All DBs
Position
LG15:complement(3638119..3651056)
Genome browser
AA seq
584 aa
AA seq
DB search
MMSHRLMATADTKLGGSPESSLQSEESKLGSEESRMRSTGPVGSWESELASIQHSLKFVL
KLREEFVCPICSGVVLNPQQNSCGHIYCFHCLQGLLESSSPSSPVCPVDGAVITPAEVFQ
DNCCKREISSLEVFCTNSPACTSVITLHQLQEHLRSCQHEQLQCTNPGCRAVLQRRCLQE
HLTNTCLHRTEPCPHCGQPHRLSLIQDHVQSTCPDVEVDCPSSCSQKVPRHKLTEHRESC
PEVHVFCSYKKFGCSVQDKRGKVKLHEDAGVNHHMLLVLRSNTNLEQQVGVLQEEVLLRQ
QEAQADGLLLAGLQKKIQPLLQQSSCHERSVATAQRTLNRQEDVLSTVQLEVQQVSRGLP
GLEELEQLRKSLDAVMQEVSAVEALREHLGTLEENLKHQSGLLDLHAAQLSRNMQHLQEL
EATSYDGKLIWKIQDFRKRRDAEAKGQPLCLSSRPFHTGRCGYKMAIKAYLNGDGEGRGT
HLSLYVVLMPGDFDALLPWPFRQTVSLSILDQSGAGNHRSLNFRPDPTSKSFQQPAADSV
SNVASGFSCFVPLDKLETPQNAAYVKDDTLFVKVKVDMAGLENL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacacagactcatggccaccgcagatacaaagctgggaggatccccggagtcc
agtttgcagtcggaggagtcgaagctggggtcagaggagtccaggatgaggtcgaccggc
cccgtgggctcctgggagtcggagctggcctccatccagcactccctgaagtttgtgttg
aagctgagggaggagtttgtttgtcccatctgcagtggagtcgtgctcaacccccagcag
aactcctgtggacacatctactgcttccactgcctccaaggactgctggagagttcttca
ccgtccagcccagtttgtccagtggacggagccgtgatcacaccagctgaggttttccag
gacaactgctgcaaacgagagatctccagtttagaggtgttctgcaccaactccccggca
tgtacctctgtcatcacgttacaccaactgcaggagcacctgaggtcctgtcagcatgag
cagctgcagtgcaccaatccaggctgcagggcggtgctacagaggagatgcctgcaggaa
cacctgaccaacacctgtcttcaccggacggagccctgcccacactgcgggcaaccgcac
cgactcagcctgatccaggatcacgtgcagagcacgtgtccagacgtggaggtggactgt
cccagcagctgctcgcagaaggttcccagacacaagctgacggagcacagagagtcgtgt
cctgaggttcacgttttctgctcttataagaagttcggctgctctgtccaggataaaaga
gggaaagttaaactgcacgaagacgccggtgtcaaccatcacatgctgctggtcctgagg
agcaacaccaacctggaacaacaggtgggggttctccaggaggaggtgctgctgaggcag
caggaggcccaggccgacggcctactgctcgccggcctgcagaagaaaatccagccgctg
ctgcaacagagcagctgccacgaacgcagcgtcgctacagctcagaggactctgaacagg
caggaggacgtcctgtccaccgtccagctggaggtccagcaggtgtcccggggactcccc
ggtctggaggagctggagcagcttagaaagtctctggatgccgtgatgcaggaggtgtcg
gcggtcgaggccctcagagaacacctgggaactttggaggagaatctgaagcatcaatcc
ggcctcctggatctccacgccgctcagctcagtcgcaacatgcagcacctgcaggagctc
gaggccacgtcctatgacggcaaactgatctggaagatccaggacttcaggaaaaggagg
gacgccgaggccaaaggtcagccgctgtgcctgagcagcaggccgttccacactggacgc
tgcggctacaagatggccatcaaagcctatctgaacggggacggcgagggaagagggact
cacctgtccctttatgtggtcctgatgccgggagacttcgacgctctgctgccgtggcct
ttcagacagaccgtgtctctgtctattctggatcaaagcggtgccggcaaccaccgcagt
ctcaactttagacccgacccaacatccaaaagcttccaacaacccgccgccgattcggtg
agcaatgtcgcttctggattttcatgcttcgttcctctcgacaagctagagactccccag
aatgctgcgtatgtcaaagacgacacgctgttcgtcaaagtgaaggtggacatggcaggt
ttagagaacctgtaa
DBGET
integrated database retrieval system
