Xiphias gladius (swordfish): 120801397
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Entry
120801397 CDS
T07311
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04081
Hormone signaling
xgl04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
120801397 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120801397 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120801397 (rapgef4a)
Membrane trafficking [BR:
xgl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120801397 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
VTC
RA
Motif
Other DBs
NCBI-GeneID:
120801397
NCBI-ProteinID:
XP_040004279
LinkDB
All DBs
Position
LG16:14729609..14768202
Genome browser
AA seq
1025 aa
AA seq
DB search
MVAAHTSSHSSESAEWIICLDKRPAERSGEDVDIILARLKNVKAFERFHPSLLQRICLCG
FYECLEKGITLYRQGDIGTSWYAILSGSLDVKVSETSRYQDAVTICTLGTGRAFGESILD
NTPRHATIVTREFSELLRIEQRNFRALWEKYHQCMAGLLAPPYGVMESGCTADRMPDKEN
TSNKSFVSVSKHQNKKSFIESPAKPHLKCISQVPSEKILRAGKILRNAILSSAPHMIRDR
KYHLKTYKQCCVGTELVDWQLQQSSCVHSRIQAVGMWQVLLEEGVLNHVDQELNFQDKYL
FYRFLDDEQEDAPLPSEEERQESQEELQDTLLLLSQIGPDAHMRMILRKLPSERTADDLE
IIYEELLHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKGSVNVV
IYGKGAVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHGQDVLVLEKSLSSSRSSVQGASSSHYKYKVMSGTPEKILEHLLEMMRLDSQFTES
DSALDDFVLMHCVFIPNSQLCPALMAHYHAQALQGSEQEKVDYTLNNKRRVIRLVTQWAA
VHGDHLQEEDVSVAFLEEFLVAVNNDAKMIPALRDQLAELERIVKRNSEDARVSQKKHKV
LLRQFSMGDEKLQKHQPIESTDEILFKVYCLDHTYTTIRVPVATSVREVIGAVADKLGSA
EDLLLVNLSSAGEKVILKANDVSVFSTLSINGRLFACRRDQLDSLTPLPEQAGPSIGSLA
SFELMSSKDVAYHMTSYDWELFHCVHELELIYHTFGRQNVNKTTVNLDLFLRRFNEIQFW
VISEMCLCSQLSKRVQLLKKFIKIAAHCKEYRNLNAFFAVIMGLSNPAVSRLSQTWEKLP
SRFKKFYSEFENLMDPSRNHRAYRLTVAKLEPPIIPFMPLLIKDMTFTHEGNKTFIDTLV
NFEKMRMIANTVKIVRYCRSQPFCPDSPLASKTHSEVRTYVRQLNVIDNQRTLTQLSHGL
EPRRS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagcgcacacttcttcacactcgtcggaatctgccgagtggattatttgtctg
gacaagagaccagcagaacgctctggggaagatgttgacataatccttgcacgtctgaaa
aatgtgaaggccttcgagaggttccaccccagtttgctgcagcggatttgcctgtgtgga
ttctatgagtgtctggagaaaggcatcaccttgtatcgccaaggagacattggcaccagc
tggtatgccatcctctctggttcactggatgttaaagtatctgagacatcacgttatcag
gatgctgttacaatatgcacactggggactggcagggcgtttggagagtcaatcctcgat
aacaccccccgacatgccaccattgttacacgggaattcagtgagctactacgcattgag
cagaggaatttcagggctctgtgggagaaatatcatcagtgcatggcgggcctccttgcc
ccaccctatggtgtgatggaaagtggttgtactgctgacagaatgccagacaaagagaac
acaagcaacaagtcatttgtttcagtctccaaacatcagaataagaagtcattcattgaa
agtccagccaaaccccacctcaaatgcatttctcaggtgccctcagagaagatcttgcgg
gccgggaagattctccgtaacgccatcctctccagtgcgcctcacatgatcagagatagg
aagtaccatctgaaaacctataagcagtgttgtgtggggacagagttggttgactggcaa
ttgcagcagagctcatgcgtccactctcgtattcaggctgtgggcatgtggcaggtgctg
ctggaagaaggtgttctcaaccatgtcgaccaggagctgaacttccaggacaagtacctc
ttctaccgcttcctggacgatgaacaggaggatgcccctttgcccagtgaggaagagaga
caggagagccaagaggagctgcaggacaccctgctcctcctctcgcagattggacctgac
gcccacatgaggatgattctgcggaagcttccatctgaaagaacagcagatgatttagaa
atcatttatgaagagctgctccacataaaggccttatctcatctatccaccactgtaaag
agagaactggcaggagtgctgatcttcgagtcgcatgcaaaggcaggaacagtgttgttt
aatcagggggaggagggcacatcatggtacattattctgaagggttcagtcaatgtcgtc
atctatggaaaaggtgctgtttgcacgcttcatgagggagatgactttgggaaactggct
cttgtcaatgacgccccccgcgctgcttccattgtcctgcgagaggacaactgtcacttc
ctgagagtagacaaggaggacttcaacaggattttgagggatgtggaggccaacacggtg
cgtctgaaggagcatggtcaggatgttctggtgttagagaagagtctcagcagcagtcga
tcttccgtccagggagcctcgtcctcccattacaaatacaaggtaatgtcggggacgccg
gagaagattttggagcacctccttgaaatgatgcgactggattctcaattcacagagtca
gactcagctttagatgactttgtgctcatgcactgtgtcttcattccaaacagtcaacta
tgtccggcgttgatggcccactaccatgcccaggccttgcagggctccgaacaggagaag
gtggattacacactcaacaacaagcgcagggtgatccgcctggtgacgcagtgggcagct
gtacacggagatcacctgcaggaggaggatgtctcggtggccttcctagaggagtttctc
gtggcggtaaataatgatgccaaaatgattccagccctcagggatcagctagcagagctg
gagagaattgtaaagcgcaacagtgaagatgccagagtctcacagaaaaagcacaaagtc
ctactgcggcagttcagtatgggagatgagaagcttcagaaacatcagcccattgagagt
actgatgaaattctattcaaagtctactgcctcgaccatacctacaccacaatccgggtc
cccgtggccacctcagtcagggaggtcattggtgcggtggccgacaagctggggtcagca
gaggacctgctcctggtcaacctcagttcggcaggagagaaagtgatcctcaaggccaac
gatgtttcggtgttctccactctcagcataaatggacggctgtttgcctgccgaagggac
cagttggactctttgaccccgttacctgagcaggcgggtccgtctataggatcactggcc
agttttgagttgatgagctccaaggatgtggcttaccatatgacctcctatgactgggag
cttttccactgtgtacatgagcttgaactcatctaccacacgtttgggaggcaaaacgtc
aacaaaaccaccgtgaacctggatctgttcctgaggaggtttaatgaaattcagttctgg
gtgatctcagagatgtgtctgtgttctcagctcagcaagcgggtgcaacttctcaagaag
ttcatcaagattgctgcccactgtaaggagtacaggaatctaaacgccttctttgctgtc
attatgggcctgagtaacccagcagtgagcaggctgagtcagacctgggagaaacttccc
agcagattcaagaagttttacagtgaatttgaaaacttgatggacccgtccaggaaccac
cgagcgtaccgactgacagttgccaagctggagcctcccatcattcccttcatgccgctg
ctgatcaaagacatgacattcactcatgagggcaacaagacatttattgacactttggtc
aattttgaaaaaatgcgaatgatagctaacacagtgaagatagtgagatactgtaggagc
cagccgttctgtccagattcacctctggcgagcaagacccactcagaagttcggacttac
gttcgtcagctcaacgtgatcgacaaccaaagaacgctaactcagctctcgcatggactt
gagcctcgcaggtcttga
DBGET
integrated database retrieval system
