Xiphias gladius (swordfish): 120803494
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Entry
120803494 CDS
T07311
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120803494
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120803494
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
Arm_2
Motif
Other DBs
NCBI-GeneID:
120803494
NCBI-ProteinID:
XP_040007926
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All DBs
Position
LG18:complement(16292157..16308346)
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AA seq
723 aa
AA seq
DB search
MMAPEPLRSAMTIGGAEDTSLALPSDDKLRSGQQRVLDQVHTIKRSKSKPGNNGSLSPSP
TSPTPQTTYVQFGQFKFAPSKANGTFSRSSSTMSAGYYKAMNPQRSHTLSAKTIGGKHYS
TSGTWEQQISSSKWPQSPNRLKPSRSDPALVPPFSPAPAPAPGMRAKGQTAQSQQTVQGR
VNRSSIYYITSGTQMTNSQTRIVQPPSAQSHTDGKMGTIKTSKIELQQTAENSGINMSDL
TLKEAVEYLSHHDENFQQYGATFIQHITFKEERAKQEVFQLGGIPDLVTLLWSPNPGVNQ
AAAGALRNLVFKDQNNKLEVQHCGGIAKALQLLKETDSTETQKQITGLLWNLSSADELKG
ELTATVLPVLTENVVVPFTCWSDKSTNNNIHPDVYYNATGCLRNLSCSQQSGRHAMRDCC
GLIDSLMSYVQSCVAEGNPDDKSVENCACILHNLTYQLETESPECFIKYNPQTEEQFGSK
KSPTIGCFSPKSSKAQKQFSFDMEQAMPEESNPSGKKLLCHPKAMQTYLSLLGSSKKDAT
LEACCGALQNLTASRGLGSVAMSKILVQKLGAPLHISPLLRSSNSSLQKTAMFLLNNMSR
TSSLQTSLAKQVLPELTSLLSSGPRGMGKCDDTIATVCNTAWTLMLADIEVGKKVINNEL
VTSLADLSENGSFPKGSRAASLLLYNLWNEKNLQGVVKKLGLAKSVFVNDNSTAVHRSVQ
IIE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaccggagccgctgcgatcggcgatgaccatcgggggcgcggaggacacgtcg
ctcgcgctcccctccgacgacaagctgcgctcggggcagcagcgcgtgctggatcaggtg
cacaccatcaagaggagcaagtccaaacccgggaacaacggctccctgtctccatcgcct
acaagcccgactccacagacaacatatgtccagttcggacagttcaagtttgctccatcc
aaagcaaacggcaccttcagccgcagcagctccactatgtcagcaggctactacaaagcg
atgaatcctcagaggagtcacactctatccgctaaaaccattggaggaaaacattacagc
acctcaggcacatgggaacagcaaatcagttcctccaaatggccccagagtcccaacagg
ctgaaacccagtcgcagtgaccctgccttggttcctccattttctcctgcccctgcacct
gcacctgggatgagagccaaggggcagacagcccagagccagcaaaccgtccagggacga
gtaaatagaagcagcatctattacattaccagcggcactcagatgaccaacagccagaca
cgcatcgtccagccgccctctgcccagtcccacactgatggcaagatgggtaccatcaaa
acatctaagatagagctacagcaaacggcggagaacagtgggataaacatgtcagacctg
accctaaaggaggctgtagagtacctgtctcatcatgatgaaaatttccaacagtacgga
gccaccttcatccaacacatcaccttcaaagaggagcgtgccaaacaggaggttttccaa
ctagggggtatccctgatctggtgaccctgctgtggagccccaaccctggggtgaaccag
gctgcagctggggctctgaggaacctggtgtttaaagaccagaacaacaagctggaggtt
caacactgtggtggtatcgctaaggccctgcagctactaaaggagacagattctactgag
actcagaaacaaatcacgggcctgctatggaacctgtcgtccgccgatgagctgaaggga
gaacttacagcaacagtgctgcccgtcctgactgagaatgtggtggtaccattcacctgc
tggtcagacaagagcaccaacaacaacatacaccctgatgtctactacaacgccacaggg
tgcttgcggaacctgagctgttcccagcagagtgggaggcatgcaatgcgagactgctgt
ggcctcatcgactccctcatgagttacgtccagtcctgtgtggcagagggaaaccctgat
gacaagtctgtggagaactgtgcatgcatcctccataacttgacctatcaactggagaca
gagtcccctgagtgcttcatcaagtacaatcctcagacagaggagcagtttgggagtaag
aaaagccccacaattggatgcttcagccccaagagcagcaaggctcaaaagcagttttcg
tttgacatggaacaggcaatgccagaggagagtaacccatcaggtaaaaagttgttgtgc
catcccaaagctatgcagacctacctgtctctgctgggctcgtctaagaaagatgccacc
ctggaggcctgctgtggtgccctgcagaacctcactgccagcaggggactgggctccgtt
gccatgagtaagattctggttcagaagttgggtgctccgctgcacatttcccctctgttg
aggtcatctaactctagcctgcaaaagaccgccatgttcctgctgaacaacatgtctcgg
accagcagtttgcagacctccttggcaaagcaggttctacctgagctcacaagcctcctg
tcctctggcccccgggggatgggaaaatgtgacgacactatagcaacagtttgcaacaca
gcatggactctgatgctggcagacattgaggtcggcaagaaagtcatcaataatgaactg
gtgacatccctggctgacctcagtgagaacgggtctttccccaaaggcagcagggcagcc
tcactgctgctctacaacttatggaatgagaagaatttgcaaggagttgtgaaaaagctg
ggattggccaaatcggtttttgtcaatgacaacagcacagcagtgcacaggtcggtgcag
attatcgagtga
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