Xiphias gladius (swordfish): 120804372
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Entry
120804372 CDS
T07311
Symbol
zgc:103759
Name
(RefSeq) U8 snoRNA-decapping enzyme
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00230
Purine metabolism
xgl01100
Metabolic pathways
xgl01232
Nucleotide metabolism
xgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
120804372 (zgc:103759)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120804372 (zgc:103759)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120804372 (zgc:103759)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
120804372 (zgc:103759)
3.6.1.64 inosine diphosphate phosphatase
120804372 (zgc:103759)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
120804372 (zgc:103759)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nudt16-like
NUDIX
BChl_A
Motif
Other DBs
NCBI-GeneID:
120804372
NCBI-ProteinID:
XP_040009737
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Position
LG18
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AA seq
219 aa
AA seq
DB search
MASGQLSRAEALACSGCRHACHVMLYSDTKTQLFGKIPIRHIILMQMRFDGLLGFPGGLV
NPTEETLEAGLSRELLEELGVALPISVEDHVDSCHAPASSLSSSSRLITHFYVKKMEEEQ
IREVERAAASTATDHGQEVLGMVRVPLYTTKGGGGLASFLSHSFIGNARSQLVGSLLRFN
LVAPKEVQKALTHSLKINTHTSEDLKVVFSLTEAKRKRL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggccagtggacagttgtcgagggcagaggcgttggcatgctcaggctgcaggcatgca
tgccacgtgatgctctactctgacacgaaaactcagctgtttgggaagattcccatcaga
catatcatactgatgcagatgcgttttgacggtctgctgggtttccctggcgggcttgtt
aacccaacggaggagaccctggaggcgggccttagcagggaattgttggaggagctgggc
gtggctcttcctatatcggtagaagatcatgtggactcttgccatgcccctgcttcatcc
ctctcctcctcctcccgtcttatcactcacttctatgtgaagaagatggaagaggagcag
attagggaggtggagagagcagctgcatccactgcaacagatcatggacaggaggttctg
ggaatggtcagagtcccgctctacaccacaaaaggcgggggaggcctcgcgtctttcctg
tcgcactcgttcatcggcaatgctcgctcccagctggtcggctctctgctgcgcttcaac
ctggtcgcacccaaggaggtgcaaaaagccctcacacactctctgaagataaacacacac
acctcagaggacctgaaagtggtcttttcgctgacagaggcgaagaggaaacgcctttga
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