Xiphias gladius (swordfish): 120805697
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Entry
120805697 CDS
T07311
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00310
Lysine degradation
xgl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120805697 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120805697 (prdm6)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120805697 (prdm6)
Enzymes [BR:
xgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
120805697 (prdm6)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120805697 (prdm6)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120805697 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
120805697
NCBI-ProteinID:
XP_040012112
LinkDB
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Position
LG19:1286163..1376900
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AA seq
638 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLAPPPPPPDRLSVPVDGLRPSRLHS
HLLASTHCTSSPSSSSSTSSSAAPSSAALTPSSSISISASTGLSQLPVPQQIALFGQALA
PVCPGGGGGGGPGGGGGGDLVVVIPPENQLGHNPAAGLLHQTKEQGCGGVGVVSSSVKSS
GSGAGGEEGGKGATPRFKLTSEELDYYLYGQQRMEIIPLSNHTGELNNRCDMCADNRNGE
CPMHGPLHSLRRLVGTSSSAAPVTLPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIP
QGTWIGPFQGVPLLLDKLQSGGVRNTRHLWEIYDAEGTLQHFIDGNDPSKSSWMRYIRCA
RHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPA
TVVEAMTRQESLQSFSKNSKPSSSSSSSSTPSTTLMRSMVFPHSPCSRSFSLLDKVGVGV
QSDSSFGQLGSKNQRVLASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCPQNP
DRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPF
KCERCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggcgacccgagcggctcggccttcctgaaggtggacccgtcctacctg
cagcactggcagcagctcttccctcaggcgcagctgaaggctcctctggccccgccgccg
cctccacctgaccgtctctccgtccccgtggacggcctgcgcccgtcccgcctgcacagc
cacctgctggcctccacacactgcacctcctccccctcctcctcctcttctacatcctct
tcggcggctccttcttcggcggctctcaccccatcctcctccatctccatctccgcctcc
acagggctctcccagctgcccgtgccccagcagatcgcgctctttgggcaggctttggcc
ccggtgtgccccggcggtgggggaggaggaggaccgggaggaggcggagggggagacctg
gtggtggtcatccctccggagaaccagctgggtcacaacccggcggcggggctgctccac
cagaccaaagagcagggctgcgggggggtgggggtggtgtcgtccagcgtgaagagcagc
ggcagcggagcaggtggcgaggagggcggcaaaggagcgacgccacggttcaaactgacg
tcggaggagctggactactacctgtacggacagcagaggatggagatcatcccgctgagc
aaccacacgggagagctcaacaaccgctgtgacatgtgcgcggacaacaggaacggcgag
tgtccgatgcacggccctcttcactccctgcgtcgactcgtcggcaccagcagctcggcg
gctcccgtcaccctgccggacgtccccgattggctcagagacctgcccagggaggtgtgt
ctgtgcactagtacagttcctggtctgggttacgggatctgtgcggctcagaggatccct
cagggaacctggatcggcccgttccagggagtcccgctgctgctggacaaactgcagtcc
ggaggcgtcaggaacacacgacacctgtgggagatctatgatgcagaggggacgttgcag
cactttatcgatggtaatgatcccagtaaatccagctggatgaggtacatccgctgtgcc
agacactgcggagagcagaacatgatggttgtacagtacaggtcctgtatcttctacaga
gcatgcatggatatccccagaggaacagagctgctggtctggtacaatgactcctacact
tcgttcttcggcatcccgctgcagtgcatcgctcaggacgaaaacttaaacgtcccagcc
acggtggtggaggccatgaccaggcaggagtctctccaatccttcagcaagaacagcaaa
ccctcctcctcgtcttcctcctcctctaccccctccaccaccctcatgcgctccatggtc
ttcccccactccccttgctctaggagtttctccctgttagacaaggtcggggtcggggtt
cagtcggactcgagtttcggccagttggggtcaaagaaccagcgagtcctggcaagccca
acctctaccagccagctgagtagcgagttcagcgactggcacctgtggaagtgtggccaa
tgcttcaaaaccttcacccagaggatccttctgcagatgcacgtctgtccgcagaatcct
gacagaccgtaccagtgtggccactgctcccagtccttctctcagccatcagagttgagg
aaccatgtggtgacgcactcaagtgaccgacccttcaaatgtggatactgcggccgggcg
ttcgccggtgccacaacgctcaacaaccacatccgcacgcacaccggagagaagccgttc
aagtgcgagcgttgcgaccgcagcttcacacaggccactcagctcagccgccatcagcga
cttcctaacgagtgtaaaccagtgaacgaaagcagcgagtccatcgaggtggattaa
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