KEGG   Xiphias gladius (swordfish): 120806563
Entry
120806563         CDS       T07311                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl04010  MAPK signaling pathway
xgl04137  Mitophagy - animal
xgl04141  Protein processing in endoplasmic reticulum
xgl04210  Apoptosis
xgl04217  Necroptosis
xgl04621  NOD-like receptor signaling pathway
xgl04622  RIG-I-like receptor signaling pathway
xgl04920  Adipocytokine signaling pathway
xgl05132  Salmonella infection
xgl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120806563
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    120806563
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    120806563
  09143 Cell growth and death
   04210 Apoptosis
    120806563
   04217 Necroptosis
    120806563
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    120806563
   04622 RIG-I-like receptor signaling pathway
    120806563
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    120806563
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120806563
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120806563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xgl03019]
    120806563
   04121 Ubiquitin system [BR:xgl04121]
    120806563
Enzymes [BR:xgl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120806563
Messenger RNA biogenesis [BR:xgl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     120806563
Ubiquitin system [BR:xgl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    120806563
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 ATG16 zf-C3HC4_4 zf-RING_6
Other DBs
NCBI-GeneID: 120806563
NCBI-ProteinID: XP_040013793
LinkDB
Position
LG20:complement(21154973..21172538)
AA seq 596 aa
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCNACIKEDIFEEPTSILKQGCAFPDNAVRREVENLSAVCINESCTWKGSIKE
YELNHEGKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCTKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAASSSSSSSGPPGPTASAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEKTKV
AELGRRCTDLEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQLE
RTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFGKKRQDAVAGRAPAMFSPAFYTSK
YGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHIID
AFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggccacgcaggaaccgtccccgccttcgtccatggagagcaataaacccggcttcccc
aagaagatcctgggcaataagctggaggacaagcacctgtgcaactgctgccacaacata
ctcagacgaccatttcaagcccagtgtggacaccgcttctgttcctactgcttcaacagg
acagtgagtaatggaccccagaaatgcaacgcttgcataaaagaggatatttttgaggag
cctacatcgattttgaaacaaggatgcgcttttcctgacaacgcagttcgaagggaagtt
gaaaacctatcagctgtttgtatcaatgaaagttgcacttggaaagggagtattaaagag
tatgagctgaaccacgaggggaagtgtgagttcatgatcatcccctgtccctcctgtaaa
gaacgaattcgcttcaacgaacaggagcgccacaatgaacgagagtgcccggagagaacg
ctcaactgcaagtactgcaaggagccatttcacttcaaaaatatcaaggcacatgatgag
atctgtcccaagtacccgatgatctgcgaaggctgcgccaagaagaaaatacccagagaa
aagtacgtggaccatattaagttctgcaccaaattcagaactccgtgtcgatttcatgtc
gtgggatgtgatatgtctgtggagaaggaaaagattcatgaccatgagcgcgcctatgcc
tacgagcacctcaacctgttgctgcactacatcatgggcatgaaagtgagcatggagggc
ctgcagccccagggactggaactagccggacacaaactggtggaactccaacagtccctc
agggagctggaggccagagtctcccagctcagcaccacctcttctgggcctcccgtgcag
ggagccgccgcctcctcctcatcttccagctccggtccccctggtccaaccgcttcagct
cctctccctccacctcccaccctggcgcccaccctctctgtgtctacctccttcacacct
ttgcccagctcggtgggggcagcgttggagctccagctccacagcgagaagaccaaggtg
gccgagctgggccgcaggtgcacggacctcgaagttaaagccgggacgttcgaaaatgtg
gtgtgtgtcctgaacagagaagtggagaggtttgccaccaccatggaggccagcaaccgt
cagcataagctggaccaggataagatcgaggcgctgagtaataaggtgcggcagctggag
aggacagttgggctgaaggacctgacagtcgctgagatggagggccgcctgagggaaatg
tctgccactacctttgacggcgtcttcgtctggagaatctctgatttcggcaaaaagaga
caggatgccgtcgcaggtcgagcccccgccatgttctcaccagccttctacaccagtaag
tacggctataagatgtgtctgcggatctatctgaatggagatgggacggggcgcggcagc
cacttgtccttgttctttgtggtgatgaggggactgagcgacgcattgctcaaatggccc
ttcaaccagaaggtgactctgatgctgctggaccagagcaacagggagcacatcatcgac
gcctttagacccgatgtcacttcctcctccttccagagacctgtgagcgagatgaacatc
gccagcggctgtccgctcttctgcccgctctccaagctcgacgccaagaactcttacatc
cgcgacgacaccatcttcatcaaggcgatcgtggacctcaccggcctctag

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