Xanthomonas hawaiiensis: PG878_09840
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Entry
PG878_09840 CDS
T09990
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha01501
beta-Lactam resistance
xha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PG878_09840
01503 Cationic antimicrobial peptide (CAMP) resistance
PG878_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xha03036
]
PG878_09840
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xha02000
]
PG878_09840
01504 Antimicrobial resistance genes [BR:
xha01504
]
PG878_09840
Chromosome and associated proteins [BR:
xha03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PG878_09840
Transporters [BR:
xha02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PG878_09840
Antimicrobial resistance genes [BR:
xha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PG878_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_CzcB
BSH_RND
CzcB_C
BSH_CusB
RND-MFP_C
Beta-barrel_RND
Biotin_lipoyl
Beta-barrel_YknX
HH_MFP_RND
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
WNH46719
LinkDB
All DBs
Position
2266112..2267230
Genome browser
AA seq
372 aa
AA seq
DB search
MTRPLTRRTATCAAALLVTTTLLLGACKPAAEAKAKAADSEKAPEAVPVEVAAASRRAVA
ASYSGTAALEARAESQVVAKTSGVALAVLAEEGQQVRAGQPLVRLDPDRARLALAQSEAQ
LRKLENNYRRSQQLVGQQLVSAADVDQIKYDLANVRAQHQLASLELSYATVVAPISGVIA
SRSIKTGNFVQINTPIFRIVDDSRLEATLNVPERELATLKTGQPVTLLADALPGKQFRGR
VDRIAPVVDAGSGTFRVVCAFDEGAEALQPGMFGRIRIDYDQRTDALVVPRLALLDDGEP
AVFRVVAGKVARVPVTLGYAEGPWVEIRQGLQAGDQVVTAGKVALRDGSRVQVIAPQREV
AAAAPTATAGAR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaccgctcacgcgccgcactgccacttgcgccgccgcgctgctggtcaccacc
acgctgctgctcggcgcctgcaagccggccgcggaggccaaggccaaggcggccgacagc
gagaaggcgccggaggcggtgccggtggaagtggccgcggccagccgccgcgcggtggcg
gccagctacagcggcaccgcggcgctggaggcgcgcgcggagtcgcaggtggtcgccaag
acctccggcgtggccctggcggtattggccgaagaaggccagcaggtgcgcgccgggcaa
ccgctggtgcggctggacccggaccgcgcgcgcctggcgttggcgcagagcgaggcgcaa
ctgcgcaagctggagaacaactaccgccgctcgcagcagttggtgggccagcaactggtc
agtgccgccgacgtcgaccagatcaagtacgacctggccaacgtgcgcgcacaacaccag
ttggcgtcgctggaactgtcctacgccacggtggtggcgccgatttccggggtgatcgcc
tcgcgctcgatcaagaccggcaacttcgtgcagatcaacacgccgatcttccgcatcgtc
gacgattcgcggctggaggccacgctcaacgtgcccgagcgcgaactggccacgctcaag
accgggcagccggtgaccctgctggccgacgcgctgccgggcaagcagttccgcggccgg
gtcgaccgcatcgcgccggtggtggatgccggcagcggcaccttccgcgtggtctgcgcc
ttcgacgagggtgccgaagcgctgcagccgggcatgttcggccgcatccgcatcgactac
gaccagcgcaccgatgcgctggtggtgccgcgactggcgctgctcgacgatggcgagccg
gcggtgttccgcgtggtcgccggcaaggtcgcgcgggtgccggtgacgctgggctatgcc
gaagggccgtgggtggagatccgccagggcctgcaggccggcgatcaggtggtcaccgcc
ggcaaggtggcgttgcgcgacggtagccgcgtgcaggtgatcgcgccgcagcgcgaggtt
gccgcggccgctccgaccgccaccgccggagcgcgctga
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