Xanthomonas hawaiiensis: PG878_13260
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Entry
PG878_13260 CDS
T09990
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha01501
beta-Lactam resistance
xha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PG878_13260
01503 Cationic antimicrobial peptide (CAMP) resistance
PG878_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xha03036
]
PG878_13260
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xha02000
]
PG878_13260
01504 Antimicrobial resistance genes [BR:
xha01504
]
PG878_13260
Chromosome and associated proteins [BR:
xha03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PG878_13260
Transporters [BR:
xha02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PG878_13260
Antimicrobial resistance genes [BR:
xha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PG878_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CusB
Beta-barrel_RND_2
HH_EMRA
HH_AAEA_pHBA
BSH_CzcB
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
WNH43494
LinkDB
All DBs
Position
complement(3081201..3082379)
Genome browser
AA seq
392 aa
AA seq
DB search
MSLAVAASLLLSACGAPPGGPPPAEGTPEMGVLTVAARPVALTTALPGRTVPYLIADVRP
QVNGIIQSRAFREGSDVQAGQALYQIDPATYRASYDSSVAALGKAQATLRTARLKAERYH
ELIKVSAISKQDDDDADAALGQAEADVAAAKANVETARINLAYARVAAPISGRIGKSSVT
PGALVTASQATALATIQQLDPIYVDVTQPSASLLRLKQALAAGELEQADAKAAKVSLLLE
DGSPYPLQGRLEFSDVTVDQNTGSITLRAVFPNPNAELLPGMYVRAVLQEGTKDQAILVP
QQAVSRNGAGKPTAYVVGPDHKLQLRVLETDRAVGDQWLVRSGLRPGEHLVVEGLPRARP
GVTVKTVPWQPPATASAPAASASAAAAPRAAN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttgtctctggccgtcgcggcctccctgctgctgagcgcctgcggcgcccccccgggcggt
ccgccgccggcggagggcaccccggagatgggggtactgaccgtggccgcgcgtcccgtc
gcactgaccaccgccctgccgggccgcaccgtgccgtacctgatcgccgacgtgcgcccg
caggtgaacgggatcatccagtcgcgcgccttccgcgaaggcagcgacgtccaggcgggc
caggccctgtatcagatcgatccggccacctatcgcgccagctacgacagttccgtcgcc
gcgctcggcaaggcgcaggcgaccctgcgcacggcgcggttgaaggccgagcgctaccac
gaactgatcaaggtctcggcgatcagcaagcaggacgacgacgatgccgatgccgcgctt
ggtcaggccgaggcggatgtcgccgcggccaaggccaacgtggaaaccgcccgcatcaac
ctggcttatgcgcgggtcgcggcgccgatttccgggcgcatcggcaaatccagcgtgact
cccggggcgctggtcacggccagtcaggcgacggcgctggccaccatccagcaactggac
ccgatctacgtcgacgtcacccagcccagcgcctcgttgctgcggctcaagcaggcgctg
gccgcgggcgagctggagcaggccgatgccaaggcggcgaaggtgagcctgctgctggag
gacggaagcccgtatccgctgcagggacggctggagttctccgacgtcaccgtcgaccag
aacaccggctcgatcaccttgcgtgcggtgttccccaatccgaacgcggagctgttgccc
ggcatgtacgtgcgcgcggtgctgcaggaaggaaccaaggaccaggccatcctggtgccg
cagcaggcggtatcgcgcaacggcgccggtaagccgaccgcctacgtggtcggccccgac
cacaagctgcagctgcgggtgctggagaccgatcgcgcggtcggcgaccagtggttggtg
cgcagcgggctcaggccgggcgagcacctggtggtcgagggcctgccgcgggcgcggccc
ggggtgacggtcaagaccgtgccgtggcagccgccggccaccgcctctgcgcctgcggcg
tccgcctctgccgcggccgcgccgcgcgccgcgaactga
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